Canonical Allele Identifier: CA340176245

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46658197T>A (hg19) ; chr1:g.46192525T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46192525T>A , CM000663.2:g.46192525T>A	GRCh38
NC_000001.10:g.46658197T>A , CM000663.1:g.46658197T>A	GRCh37
NC_000001.9:g.46430784T>A	NCBI36
NG_009205.2:g.32781A>T
NG_009205.3:g.32781A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1277A>T (POMGNT1)	ENSP00000379698.4:p.Asn426Ile
ENST00000477114.2:n.1839A>T (POMGNT1)
ENST00000497439.6:n.1449A>T (POMGNT1)
ENST00000684817.1:n.1637A>T (POMGNT1)
ENST00000684898.1:n.1839A>T (POMGNT1)
ENST00000685230.1:c.*587A>T (POMGNT1)	ENSP00000510305.1:n.*587A>T
ENST00000685275.1:n.1824A>T (POMGNT1)
ENST00000685444.1:c.1178A>T (POMGNT1)	ENSP00000510762.1:p.Asn393Ile
ENST00000685704.1:n.1839A>T (POMGNT1)
ENST00000685775.1:n.2804A>T (POMGNT1)
ENST00000685833.1:n.2155A>T (POMGNT1)
ENST00000686252.1:n.2351A>T (POMGNT1)
ENST00000686379.1:c.*401A>T (POMGNT1)	ENSP00000508913.1:n.*401A>T
ENST00000686724.1:n.1449A>T (POMGNT1)
ENST00000686737.1:c.1277A>T (POMGNT1)	ENSP00000508736.1:p.Asn426Ile
ENST00000687112.1:n.2143A>T (POMGNT1)
ENST00000687149.1:c.1277A>T (POMGNT1)	ENSP00000509745.1:p.Asn426Ile
ENST00000687197.1:c.*217A>T (POMGNT1)	ENSP00000510749.1:n.*217A>T
ENST00000687235.1:n.1839A>T (POMGNT1)
ENST00000687613.1:n.2027A>T (POMGNT1)
ENST00000687683.1:c.1277A>T (POMGNT1)	ENSP00000508522.1:p.Asn426Ile
ENST00000688032.1:n.1839A>T (POMGNT1)
ENST00000688596.1:n.1928A>T (POMGNT1)
ENST00000688608.1:c.1178A>T (POMGNT1)	ENSP00000508890.1:p.Asn393Ile
ENST00000688919.1:n.2473A>T (POMGNT1)
ENST00000689031.1:n.1839A>T (POMGNT1)
ENST00000689717.1:n.1449A>T (POMGNT1)
ENST00000689756.1:c.*909A>T (POMGNT1)	ENSP00000509023.1:n.*909A>T
ENST00000690377.1:n.1624A>T (POMGNT1)
ENST00000690678.1:c.1277A>T (POMGNT1)	ENSP00000508703.1:p.Asn426Ile
ENST00000691209.1:c.*217A>T (POMGNT1)	ENSP00000510112.1:n.*217A>T
ENST00000691243.1:c.1277A>T (POMGNT1)	ENSP00000510654.1:p.Asn426Ile
ENST00000692169.1:n.1426A>T (POMGNT1)
ENST00000692202.1:n.1852A>T (POMGNT1)
ENST00000692322.1:c.*1129A>T (POMGNT1)	ENSP00000509017.1:n.*1129A>T
ENST00000692369.1:c.1277A>T (POMGNT1)	ENSP00000508453.1:p.Asn426Ile
ENST00000692599.1:n.1839A>T (POMGNT1)
ENST00000692635.1:c.*217A>T (POMGNT1)	ENSP00000508425.1:n.*217A>T
ENST00000693168.1:n.1538A>T (POMGNT1)
ENST00000693218.1:c.1277A>T (POMGNT1)	ENSP00000510577.1:p.Asn426Ile
ENST00000693223.1:n.2225A>T (POMGNT1)
ENST00000693365.1:n.3911A>T (POMGNT1)
ENST00000371984.8:c.1277A>T (POMGNT1) MANE Select	ENSP00000361052.3:p.Asn426Ile
ENST00000371984.7:c.1277A>T (POMGNT1)	ENSP00000361052.3:p.Asn426Ile
ENST00000371992.1:c.1277A>T (POMGNT1)	ENSP00000361060.1:p.Asn426Ile
ENST00000396420.7:c.*946A>T (POMGNT1)	ENSP00000379698.3:n.*946A>T
ENST00000485714.1:n.663A>T (POMGNT1)
NM_001243766.1:c.1277A>T (POMGNT1)	NP_001230695.1:p.Asn426Ile
NM_001290129.1:c.1211A>T (POMGNT1)	NP_001277058.1:p.Asn404Ile
NM_001290130.1:c.848A>T (POMGNT1)	NP_001277059.1:p.Asn283Ile
NM_017739.3:c.1277A>T (POMGNT1)	NP_060209.3:p.Asn426Ile
XM_005271010.1:c.1277A>T (POMGNT1)	XP_005271067.1:p.Asn426Ile
XM_006710755.1:c.1277A>T (POMGNT1)	XP_006710818.1:p.Asn426Ile
XM_006710756.1:c.1277A>T (POMGNT1)	XP_006710819.1:p.Asn426Ile
XM_011540460.1:c.679-3677T>A (TSPAN1)	XP_011538762.1:n.679-3677T>A
XM_011540461.1:c.634-3677T>A (TSPAN1)	XP_011538763.1:n.634-3677T>A
XM_011541759.1:c.1211A>T (POMGNT1)	XP_011540061.1:p.Asn404Ile
XM_011541760.1:c.1211A>T (POMGNT1)	XP_011540062.1:p.Asn404Ile
XM_011541761.1:c.185A>T (POMGNT1)	XP_011540063.1:p.Asn62Ile
XR_946706.1:n.1437A>T (POMGNT1)
XM_011540460.3:c.679-3677T>A (TSPAN1)	XP_011538762.1:n.679-3677T>A
XM_011541760.3:c.1211A>T (POMGNT1)	XP_011540062.1:p.Asn404Ile
XM_017001690.1:c.1277A>T (POMGNT1)	XP_016857179.1:p.Asn426Ile
NM_001243766.2:c.1277A>T (POMGNT1)	NP_001230695.2:p.Asn426Ile
NM_001290129.2:c.1211A>T (POMGNT1)	NP_001277058.2:p.Asn404Ile
NM_001290130.2:c.848A>T (POMGNT1)	NP_001277059.2:p.Asn283Ile
NM_017739.4:c.1277A>T (POMGNT1) MANE Select	NP_060209.4:p.Asn426Ile