Canonical Allele Identifier: CA340173739
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 2025161
ClinVar RCV Id: RCV002848232

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46192172C>A , CM000663.2:g.46192172C>A GRCh38
NC_000001.10:g.46657844C>A , CM000663.1:g.46657844C>A GRCh37
NC_000001.9:g.46430431C>A NCBI36
NG_009205.2:g.33134G>T
NG_009205.3:g.33134G>T

Transcript Alleles

HGVS Amino-acid change
ENST00000396420.8:c.1465G>T (POMGNT1) ENSP00000379698.4:p.Glu489Ter
ENST00000477114.2:n.2027G>T (POMGNT1)
ENST00000497439.6:n.1637G>T (POMGNT1)
ENST00000684817.1:n.1825G>T (POMGNT1)
ENST00000684898.1:n.2027G>T (POMGNT1)
ENST00000685230.1:c.*775G>T (POMGNT1) ENSP00000510305.1:n.*775G>T
ENST00000685275.1:n.2012G>T (POMGNT1)
ENST00000685444.1:c.1366G>T (POMGNT1) ENSP00000510762.1:p.Glu456Ter
ENST00000685704.1:n.2027G>T (POMGNT1)
ENST00000685775.1:n.2992G>T (POMGNT1)
ENST00000685833.1:n.2343G>T (POMGNT1)
ENST00000686252.1:n.2539G>T (POMGNT1)
ENST00000686379.1:c.*589G>T (POMGNT1) ENSP00000508913.1:n.*589G>T
ENST00000686724.1:n.1637G>T (POMGNT1)
ENST00000686737.1:c.1465G>T (POMGNT1) ENSP00000508736.1:p.Glu489Ter
ENST00000687112.1:n.2331G>T (POMGNT1)
ENST00000687149.1:c.1465G>T (POMGNT1) ENSP00000509745.1:p.Glu489Ter
ENST00000687197.1:c.*405G>T (POMGNT1) ENSP00000510749.1:n.*405G>T
ENST00000687235.1:n.2027G>T (POMGNT1)
ENST00000687613.1:n.2215G>T (POMGNT1)
ENST00000687683.1:c.1465G>T (POMGNT1) ENSP00000508522.1:p.Glu489Ter
ENST00000688032.1:n.2027G>T (POMGNT1)
ENST00000688596.1:n.2116G>T (POMGNT1)
ENST00000688608.1:c.1366G>T (POMGNT1) ENSP00000508890.1:p.Glu456Ter
ENST00000688919.1:n.2661G>T (POMGNT1)
ENST00000689031.1:n.2027G>T (POMGNT1)
ENST00000689717.1:n.1637G>T (POMGNT1)
ENST00000689756.1:c.*1097G>T (POMGNT1) ENSP00000509023.1:n.*1097G>T
ENST00000690377.1:n.1812G>T (POMGNT1)
ENST00000690678.1:c.1465G>T (POMGNT1) ENSP00000508703.1:p.Glu489Ter
ENST00000691209.1:c.*405G>T (POMGNT1) ENSP00000510112.1:n.*405G>T
ENST00000691243.1:c.1465G>T (POMGNT1) ENSP00000510654.1:p.Glu489Ter
ENST00000692169.1:n.1614G>T (POMGNT1)
ENST00000692202.1:n.2040G>T (POMGNT1)
ENST00000692322.1:c.*1317G>T (POMGNT1) ENSP00000509017.1:n.*1317G>T
ENST00000692369.1:c.1465G>T (POMGNT1) ENSP00000508453.1:p.Glu489Ter
ENST00000692599.1:n.2027G>T (POMGNT1)
ENST00000692635.1:c.*405G>T (POMGNT1) ENSP00000508425.1:n.*405G>T
ENST00000693168.1:n.1726G>T (POMGNT1)
ENST00000693218.1:c.1465G>T (POMGNT1) ENSP00000510577.1:p.Glu489Ter
ENST00000693223.1:n.2413G>T (POMGNT1)
ENST00000693365.1:n.4099G>T (POMGNT1)
ENST00000371984.8:c.1465G>T (POMGNT1) MANE Select ENSP00000361052.3:p.Glu489Ter
ENST00000371984.7:c.1465G>T (POMGNT1) ENSP00000361052.3:p.Glu489Ter
ENST00000371992.1:c.1465G>T (POMGNT1) ENSP00000361060.1:p.Glu489Ter
ENST00000396420.7:c.*1134G>T (POMGNT1) ENSP00000379698.3:n.*1134G>T
ENST00000463030.1:n.86G>T (POMGNT1)
ENST00000485714.1:n.851G>T (POMGNT1)
NM_001243766.1:c.1465G>T (POMGNT1) NP_001230695.1:p.Glu489Ter
NM_001290129.1:c.1399G>T (POMGNT1) NP_001277058.1:p.Glu467Ter
NM_001290130.1:c.1036G>T (POMGNT1) NP_001277059.1:p.Glu346Ter
NM_017739.3:c.1465G>T (POMGNT1) NP_060209.3:p.Glu489Ter
XM_005271010.1:c.1465G>T (POMGNT1) XP_005271067.1:p.Glu489Ter
XM_006710755.1:c.1465G>T (POMGNT1) XP_006710818.1:p.Glu489Ter
XM_006710756.1:c.1465G>T (POMGNT1) XP_006710819.1:p.Glu489Ter
XM_011540460.1:c.679-4030C>A (TSPAN1) XP_011538762.1:n.679-4030C>A
XM_011540461.1:c.634-4030C>A (TSPAN1) XP_011538763.1:n.634-4030C>A
XM_011541759.1:c.1399G>T (POMGNT1) XP_011540061.1:p.Glu467Ter
XM_011541760.1:c.1399G>T (POMGNT1) XP_011540062.1:p.Glu467Ter
XM_011541761.1:c.373G>T (POMGNT1) XP_011540063.1:p.Glu125Ter
XR_946706.1:n.1625G>T (POMGNT1)
XM_011540460.3:c.679-4030C>A (TSPAN1) XP_011538762.1:n.679-4030C>A
XM_011541760.3:c.1399G>T (POMGNT1) XP_011540062.1:p.Glu467Ter
XM_017001690.1:c.1465G>T (POMGNT1) XP_016857179.1:p.Glu489Ter
NM_001243766.2:c.1465G>T (POMGNT1) NP_001230695.2:p.Glu489Ter
NM_001290129.2:c.1399G>T (POMGNT1) NP_001277058.2:p.Glu467Ter
NM_001290130.2:c.1036G>T (POMGNT1) NP_001277059.2:p.Glu346Ter
NM_017739.4:c.1465G>T (POMGNT1) MANE Select NP_060209.4:p.Glu489Ter