Canonical Allele Identifier: CA340171538
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46189954C>G , CM000663.2:g.46189954C>G GRCh38
NC_000001.10:g.46655626C>G , CM000663.1:g.46655626C>G GRCh37
NC_000001.9:g.46428213C>G NCBI36
NG_009205.2:g.35352G>C
NG_009205.3:g.35352G>C

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1685G>C (POMGNT1) ENSP00000379698.4:p.Cys562Ser
ENST00000497439.6:n.1857G>C (POMGNT1)
ENST00000684817.1:n.2045G>C (POMGNT1)
ENST00000684898.1:n.2247G>C (POMGNT1)
ENST00000685230.1:c.*995G>C (POMGNT1) ENSP00000510305.1:n.*995G>C
ENST00000685275.1:n.2232G>C (POMGNT1)
ENST00000685444.1:c.1586G>C (POMGNT1) ENSP00000510762.1:p.Cys529Ser
ENST00000685704.1:n.2351G>C (POMGNT1)
ENST00000685833.1:n.4078G>C (POMGNT1)
ENST00000686252.1:n.2759G>C (POMGNT1)
ENST00000686379.1:c.*809G>C (POMGNT1) ENSP00000508913.1:n.*809G>C
ENST00000686724.1:n.3372G>C (POMGNT1)
ENST00000686737.1:c.1685G>C (POMGNT1) ENSP00000508736.1:p.Cys562Ser
ENST00000687112.1:n.2551G>C (POMGNT1)
ENST00000687149.1:c.1724G>C (POMGNT1) ENSP00000509745.1:p.Cys575Ser
ENST00000687197.1:c.*625G>C (POMGNT1) ENSP00000510749.1:n.*625G>C
ENST00000687235.1:n.3762G>C (POMGNT1)
ENST00000687613.1:n.2325G>C (POMGNT1)
ENST00000687683.1:c.1685G>C (POMGNT1) ENSP00000508522.1:p.Cys562Ser
ENST00000688032.1:n.2222G>C (POMGNT1)
ENST00000688596.1:n.2336G>C (POMGNT1)
ENST00000688608.1:c.1586G>C (POMGNT1) ENSP00000508890.1:p.Cys529Ser
ENST00000689031.1:n.2137G>C (POMGNT1)
ENST00000689756.1:c.*1317G>C (POMGNT1) ENSP00000509023.1:n.*1317G>C
ENST00000690377.1:n.2032G>C (POMGNT1)
ENST00000690678.1:c.1685G>C (POMGNT1) ENSP00000508703.1:p.Cys562Ser
ENST00000691209.1:c.*625G>C (POMGNT1) ENSP00000510112.1:n.*625G>C
ENST00000691243.1:c.*76G>C (POMGNT1) ENSP00000510654.1:n.*76G>C
ENST00000692202.1:n.2260G>C (POMGNT1)
ENST00000692322.1:c.*1472G>C (POMGNT1) ENSP00000509017.1:n.*1472G>C
ENST00000692369.1:c.1685G>C (POMGNT1) ENSP00000508453.1:p.Cys562Ser
ENST00000692599.1:n.3560G>C (POMGNT1)
ENST00000692635.1:c.*560G>C (POMGNT1) ENSP00000508425.1:n.*560G>C
ENST00000693168.1:n.3461G>C (POMGNT1)
ENST00000693218.1:c.*246G>C (POMGNT1) ENSP00000510577.1:n.*246G>C
ENST00000693223.1:n.2633G>C (POMGNT1)
ENST00000371984.8:c.1685G>C (POMGNT1) MANE Select ENSP00000361052.3:p.Cys562Ser
ENST00000371984.7:c.1685G>C (POMGNT1) ENSP00000361052.3:p.Cys562Ser
ENST00000371992.1:c.1685G>C (POMGNT1) ENSP00000361060.1:p.Cys562Ser
ENST00000396420.7:c.*1354G>C (POMGNT1) ENSP00000379698.3:n.*1354G>C
ENST00000480972.1:n.334G>C (POMGNT1)
NM_001243766.1:c.1685G>C (POMGNT1) NP_001230695.1:p.Cys562Ser
NM_001290129.1:c.1619G>C (POMGNT1) NP_001277058.1:p.Cys540Ser
NM_001290130.1:c.1256G>C (POMGNT1) NP_001277059.1:p.Cys419Ser
NM_017739.3:c.1685G>C (POMGNT1) NP_060209.3:p.Cys562Ser
XM_005271010.1:c.1685G>C (POMGNT1) XP_005271067.1:p.Cys562Ser
XM_006710755.1:c.1685G>C (POMGNT1) XP_006710818.1:p.Cys562Ser
XM_006710756.1:c.1685G>C (POMGNT1) XP_006710819.1:p.Cys562Ser
XM_011540460.1:c.678+4646C>G (TSPAN1) XP_011538762.1:n.678+4646C>G
XM_011540461.1:c.633+4646C>G (TSPAN1) XP_011538763.1:n.633+4646C>G
XM_011541759.1:c.1619G>C (POMGNT1) XP_011540061.1:p.Cys540Ser
XM_011541760.1:c.1619G>C (POMGNT1) XP_011540062.1:p.Cys540Ser
XM_011541761.1:c.593G>C (POMGNT1) XP_011540063.1:p.Cys198Ser
XM_011540460.3:c.678+4646C>G (TSPAN1) XP_011538762.1:n.678+4646C>G
XM_011541760.3:c.1619G>C (POMGNT1) XP_011540062.1:p.Cys540Ser
XM_017001690.1:c.1685G>C (POMGNT1) XP_016857179.1:p.Cys562Ser
NM_001243766.2:c.1685G>C (POMGNT1) NP_001230695.2:p.Cys562Ser
NM_001290129.2:c.1619G>C (POMGNT1) NP_001277058.2:p.Cys540Ser
NM_001290130.2:c.1256G>C (POMGNT1) NP_001277059.2:p.Cys419Ser
NM_017739.4:c.1685G>C (POMGNT1) MANE Select NP_060209.4:p.Cys562Ser