Canonical Allele Identifier: CA303209
Gene: SCN1A HGNC NCBI

Linked Data

ClinVar Variation Id: 189885
ClinVar RCV Id: RCV000180838
dbSNP Id: rs794726729

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.166015680del , CM000664.2:g.166015680del GRCh38
NC_000002.11:g.166872190del , CM000664.1:g.166872190del GRCh37
NC_000002.10:g.166580436del NCBI36
NG_011906.1:g.62960del , LRG_8:g.62960del

Transcript Alleles

HGVS Amino-acid Change
ENST00000689288.1:c.*1513del ENSP00000509637.1:n.*1513del
ENST00000303395.9:c.3477del ENSP00000303540.4:p.Ile1159MetfsTer5
ENST00000635750.1:c.3444del ENSP00000490799.1:p.Ile1148MetfsTer5
ENST00000635776.1:c.3444del ENSP00000490692.1:p.Ile1148MetfsTer5
ENST00000636194.1:c.*970del ENSP00000490288.1:n.*970del
ENST00000637038.1:c.275del
ENST00000637968.1:n.3729del
ENST00000637988.1:c.3444del ENSP00000490780.1:p.Ile1148MetfsTer5
ENST00000640036.1:c.3444del ENSP00000491573.1:p.Ile1148MetfsTer5
ENST00000641575.1:c.3441del ENSP00000492917.1:p.Ile1147MetfsTer5
ENST00000641603.1:c.3477del ENSP00000492945.1:p.Ile1159MetfsTer5
ENST00000641996.1:c.*3031del ENSP00000493054.1:n.*3031del
ENST00000671940.1:c.*1420del ENSP00000500336.1:n.*1420del
ENST00000673490.1:n.5950del
ENST00000674923.1:c.3477del MANE Select ENSP00000501589.1:p.Ile1159MetfsTer5
ENST00000303395.8:c.3477del ENSP00000303540.4:p.Ile1159MetfsTer5
ENST00000375405.7:c.3444del ENSP00000364554.3:p.Ile1148MetfsTer5
ENST00000409050.1:c.3393del ENSP00000386312.1:p.Ile1131MetfsTer5
ENST00000423058.6:c.3477del ENSP00000407030.2:p.Ile1159MetfsTer5
NM_001165963.1:c.3477del NP_001159435.1:p.Ile1159MetfsTer5
NM_001165964.1:c.3393del NP_001159436.1:p.Ile1131MetfsTer5
NM_001202435.1:c.3477del NP_001189364.1:p.Ile1159MetfsTer5
NM_006920.4:c.3444del , LRG_8t1:c.3444del NP_008851.3:p.Ile1148MetfsTer5
NR_110598.1:n.243del
XM_011511598.1:c.3477del XP_011509900.1:p.Ile1159MetfsTer5
XM_011511599.1:c.3477del XP_011509901.1:p.Ile1159MetfsTer5
XM_011511600.1:c.3477del XP_011509902.1:p.Ile1159MetfsTer5
XM_011511601.1:c.3477del XP_011509903.1:p.Ile1159MetfsTer5
XM_011511602.1:c.3477del XP_011509904.1:p.Ile1159MetfsTer5
XM_011511603.1:c.3474del XP_011509905.1:p.Ile1158MetfsTer5
XM_011511604.1:c.3444del XP_011509906.1:p.Ile1148MetfsTer5
XM_011511605.1:c.3441del XP_011509907.1:p.Ile1147MetfsTer5
XM_011511606.1:c.3393del XP_011509908.1:p.Ile1131MetfsTer5
XM_011511607.1:c.3477del XP_011509909.1:p.Ile1159MetfsTer5
XR_922981.1:n.3661del
NM_001165963.2:c.3477del NP_001159435.1:p.Ile1159MetfsTer5
NM_001165964.2:c.3393del NP_001159436.1:p.Ile1131MetfsTer5
NM_001202435.2:c.3477del NP_001189364.1:p.Ile1159MetfsTer5
NM_001353948.1:c.3477del NP_001340877.1:p.Ile1159MetfsTer5
NM_001353949.1:c.3444del NP_001340878.1:p.Ile1148MetfsTer5
NM_001353950.1:c.3444del NP_001340879.1:p.Ile1148MetfsTer5
NM_001353951.1:c.3444del NP_001340880.1:p.Ile1148MetfsTer5
NM_001353952.1:c.3444del NP_001340881.1:p.Ile1148MetfsTer5
NM_001353954.1:c.3441del NP_001340883.1:p.Ile1147MetfsTer5
NM_001353955.1:c.3441del NP_001340884.1:p.Ile1147MetfsTer5
NM_001353957.1:c.3393del NP_001340886.1:p.Ile1131MetfsTer5
NM_001353958.1:c.3393del NP_001340887.1:p.Ile1131MetfsTer5
NM_001353960.1:c.3390del NP_001340889.1:p.Ile1130MetfsTer5
NM_001353961.1:c.1035del NP_001340890.1:p.Ile345MetfsTer5
NM_006920.5:c.3444del NP_008851.3:p.Ile1148MetfsTer5
NR_148667.1:n.3849del
XR_001738883.1:n.3863del
XR_001738884.1:n.3835del
NM_001165963.3:c.3477del NP_001159435.1:p.Ile1159MetfsTer5
NM_001165964.3:c.3393del NP_001159436.1:p.Ile1131MetfsTer5
NM_001202435.3:c.3477del NP_001189364.1:p.Ile1159MetfsTer5
NM_001353948.2:c.3477del NP_001340877.1:p.Ile1159MetfsTer5
NM_001353949.2:c.3444del NP_001340878.1:p.Ile1148MetfsTer5
NM_001353950.2:c.3444del NP_001340879.1:p.Ile1148MetfsTer5
NM_001353951.2:c.3444del NP_001340880.1:p.Ile1148MetfsTer5
NM_001353952.2:c.3444del NP_001340881.1:p.Ile1148MetfsTer5
NM_001353954.2:c.3441del NP_001340883.1:p.Ile1147MetfsTer5
NM_001353955.2:c.3441del NP_001340884.1:p.Ile1147MetfsTer5
NM_001353957.2:c.3393del NP_001340886.1:p.Ile1131MetfsTer5
NM_001353958.2:c.3393del NP_001340887.1:p.Ile1131MetfsTer5
NM_001353960.2:c.3390del NP_001340889.1:p.Ile1130MetfsTer5
NM_001353961.2:c.1035del NP_001340890.1:p.Ile345MetfsTer5
NM_006920.6:c.3444del NP_008851.3:p.Ile1148MetfsTer5
NR_148667.2:n.3830del
NM_001165963.4:c.3477del MANE Select NP_001159435.1:p.Ile1159MetfsTer5