Canonical Allele Identifier: CA279781830

Gene: CLN3

Linked Data

• dbSNP Id: rs986505204
• gnomAD v2: 16-28493365-GAAGCTGGGAGCC-G
• gnomAD v3: 16-28482044-GAAGCTGGGAGCC-G
• gnomAD v4: 16-28482044-GAAGCTGGGAGCC-G
• MyVariant Identifiers: chr16:g.28493366_28493377del (hg19) ; chr16:g.28482045_28482056del (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000016.10:g.28482060_28482071del , CM000678.2:g.28482060_28482071del	GRCh38
NC_000016.9:g.28493381_28493392del , CM000678.1:g.28493381_28493392del	GRCh37
NC_000016.8:g.28400882_28400893del	NCBI36
NG_008654.2:g.15247_15258del , LRG_689:g.15247_15258del

Transcript Alleles

HGVS	Amino-acid change
ENST00000333496.14:c.984+49_984+60del	ENSP00000329171.9:n.984+49_984+60del
ENST00000355477.10:c.912+49_912+60del	ENSP00000347660.7:n.912+49_912+60del
ENST00000357857.14:c.894+49_894+60del	ENSP00000350523.9:n.894+49_894+60del
ENST00000359984.12:c.1056+49_1056+60del	ENSP00000353073.9:n.1056+49_1056+60del
ENST00000360019.8:c.984+49_984+60del	ENSP00000353116.3:n.984+49_984+60del
ENST00000395653.9:c.597+49_597+60del	ENSP00000379014.5:n.597+49_597+60del
ENST00000561689.6:n.1469+49_1469+60del
ENST00000564091.6:c.396+49_396+60del	ENSP00000454466.2:n.396+49_396+60del
ENST00000565316.6:c.1005+49_1005+60del	ENSP00000456117.1:n.1005+49_1005+60del
ENST00000566824.6:n.1116+49_1116+60del
ENST00000567963.6:c.894+49_894+60del	ENSP00000455387.2:n.894+49_894+60del
ENST00000568076.6:n.1485+49_1485+60del
ENST00000568422.6:c.*293+49_*293+60del	ENSP00000455549.2:n.*293+49_*293+60del
ENST00000568452.6:n.1287+49_1287+60del
ENST00000569430.7:c.1056+49_1056+60del	ENSP00000454229.1:n.1056+49_1056+60del
ENST00000628023.3:c.*352+49_*352+60del	ENSP00000486178.1:n.*352+49_*352+60del
ENST00000635861.1:c.*708+49_*708+60del	ENSP00000490034.1:n.*708+49_*708+60del
ENST00000635887.1:c.1056+49_1056+60del	ENSP00000490709.1:n.1056+49_1056+60del
ENST00000635958.1:n.1341+49_1341+60del
ENST00000636017.1:c.*580+49_*580+60del	ENSP00000490538.1:n.*580+49_*580+60del
ENST00000636078.1:n.1178+49_1178+60del
ENST00000636147.2:c.1056+49_1056+60del MANE Select	ENSP00000490105.1:n.1056+49_1056+60del
ENST00000636172.1:c.*580+49_*580+60del	ENSP00000490505.1:n.*580+49_*580+60del
ENST00000636228.1:c.750+49_750+60del	ENSP00000489627.1:n.750+49_750+60del
ENST00000636351.1:n.950+49_950+60del
ENST00000636503.1:c.1056+49_1056+60del	ENSP00000489824.1:n.1056+49_1056+60del
ENST00000636685.1:n.737+49_737+60del
ENST00000636766.1:c.1056+49_1056+60del	ENSP00000489841.1:n.1056+49_1056+60del
ENST00000636839.1:n.1430+49_1430+60del
ENST00000636853.1:n.1971+49_1971+60del
ENST00000636866.1:c.1056+49_1056+60del	ENSP00000490880.1:n.1056+49_1056+60del
ENST00000636907.1:n.1207+49_1207+60del
ENST00000636977.1:n.2426+49_2426+60del
ENST00000637050.1:n.1445+49_1445+60del
ENST00000637100.1:c.1005+49_1005+60del	ENSP00000490394.1:n.1005+49_1005+60del
ENST00000637107.1:c.*580+49_*580+60del	ENSP00000490248.1:n.*580+49_*580+60del
ENST00000637184.1:c.1056+49_1056+60del	ENSP00000489952.1:n.1056+49_1056+60del
ENST00000637299.1:c.*865+49_*865+60del	ENSP00000489823.1:n.*865+49_*865+60del
ENST00000637376.1:c.1056+49_1056+60del	ENSP00000490758.1:n.1056+49_1056+60del
ENST00000637378.1:c.228+49_228+60del	ENSP00000490831.1:n.228+49_228+60del
ENST00000637578.1:c.*580+49_*580+60del	ENSP00000490206.1:n.*580+49_*580+60del
ENST00000637699.1:c.967+49_967+60del	ENSP00000490049.1:n.967+49_967+60del
ENST00000637745.1:c.395+49_395+60del
ENST00000637871.1:c.*754+49_*754+60del	ENSP00000490670.1:n.*754+49_*754+60del
ENST00000638036.1:c.218+49_218+60del
ENST00000333496.13:c.984+49_984+60del	ENSP00000329171.9:n.984+49_984+60del
ENST00000355477.9:c.*293+49_*293+60del	ENSP00000347660.6:n.*293+49_*293+60del
ENST00000357806.11:c.759+49_759+60del	ENSP00000350457.7:n.759+49_759+60del
ENST00000357857.13:c.894+49_894+60del	ENSP00000350523.9:n.894+49_894+60del
ENST00000359984.11:c.750+49_750+60del	ENSP00000353073.8:n.750+49_750+60del
ENST00000360019.6:c.1056+49_1056+60del	ENSP00000353116.2:n.1056+49_1056+60del
ENST00000395653.8:c.756+49_756+60del	ENSP00000379014.4:n.756+49_756+60del
ENST00000561689.5:n.1025+49_1025+60del
ENST00000563874.5:n.2584+49_2584+60del
ENST00000564091.5:c.145+49_145+60del
ENST00000565140.5:c.839+49_839+60del	ENSP00000455342.1:n.839+49_839+60del
ENST00000565316.5:c.1005+49_1005+60del	ENSP00000456117.1:n.1005+49_1005+60del
ENST00000565354.5:n.369+49_369+60del
ENST00000566057.5:c.670+49_670+60del	ENSP00000456693.1:n.670+49_670+60del
ENST00000567963.5:c.906+421_906+432del	ENSP00000455387.1:n.906+421_906+432del
ENST00000568076.5:n.967+49_967+60del
ENST00000568224.4:c.822+49_822+60del	ENSP00000454253.1:n.822+49_822+60del
ENST00000568422.5:c.*293+49_*293+60del	ENSP00000455549.1:n.*293+49_*293+60del
ENST00000568452.5:n.1184+49_1184+60del
ENST00000569030.5:c.726+49_726+60del	ENSP00000454680.1:n.726+49_726+60del
ENST00000569430.5:c.1056+49_1056+60del	ENSP00000454229.1:n.1056+49_1056+60del
ENST00000628023.2:c.*352+49_*352+60del	ENSP00000486178.1:n.*352+49_*352+60del
ENST00000631023.2:c.906+421_906+432del	ENSP00000486616.1:n.906+421_906+432del
NM_000086.2:c.1056+49_1056+60del , LRG_689t1:c.1056+49_1056+60del	NP_000077.1:n.1056+49_1056+60del
NM_001042432.1:c.1056+49_1056+60del , LRG_689t2:c.1056+49_1056+60del	NP_001035897.1:n.1056+49_1056+60del
NM_001286104.1:c.984+49_984+60del	NP_001273033.1:n.984+49_984+60del
NM_001286105.1:c.756+49_756+60del	NP_001273034.1:n.756+49_756+60del
NM_001286109.1:c.822+49_822+60del	NP_001273038.1:n.822+49_822+60del
NM_001286110.1:c.894+49_894+60del	NP_001273039.1:n.894+49_894+60del
NM_001042432.2:c.1056+49_1056+60del MANE Select	NP_001035897.1:n.1056+49_1056+60del
NM_001286104.2:c.984+49_984+60del	NP_001273033.1:n.984+49_984+60del
NM_001286105.2:c.756+49_756+60del	NP_001273034.1:n.756+49_756+60del
NM_001286109.2:c.822+49_822+60del	NP_001273038.1:n.822+49_822+60del
NM_001286110.2:c.894+49_894+60del	NP_001273039.1:n.894+49_894+60del