Canonical Allele Identifier: CA278471
Gene: CTNS HGNC NCBI

Linked Data

ClinVar Variation Id: 188834
dbSNP Id: rs786204501

Genomic Alleles

HGVS Genome Assembly
NC_000017.11:g.3640224_3640227del , CM000679.2:g.3640224_3640227del GRCh38
NC_000017.10:g.3543518_3543521del , CM000679.1:g.3543518_3543521del GRCh37
NC_000017.9:g.3490267_3490270del NCBI36
NG_012489.1:g.8757_8760del
NG_052852.1:g.1098_1101del
NG_012489.2:g.8757_8760del

Transcript Alleles

HGVS Amino-acid change
ENST00000046640.9:c.18_21del MANE Select ENSP00000046640.4:p.Thr7PhefsTer7
ENST00000381870.8:c.18_21del ENSP00000371294.3:p.Thr7PhefsTer7
ENST00000399306.7:c.18_21del ENSP00000382245.2:p.Thr7PhefsTer7
ENST00000488623.6:c.-667+2908_-667+2911del ENSP00000501016.1:n.-667+2908_-667+2911de...
ENST00000574776.6:c.-156_-153del ENSP00000461118.2:n.-156_-153del
ENST00000673669.1:c.-296+2908_-296+2911del ENSP00000501123.1:n.-296+2908_-296+2911de...
ENST00000673965.1:c.18_21del ENSP00000500995.1:p.Thr7PhefsTer7
ENST00000046640.7:c.18_21del ENSP00000046640.3:p.Thr7PhefsTer7
ENST00000381870.7:c.18_21del ENSP00000371294.3:p.Thr7PhefsTer7
ENST00000399306.6:c.18_21del ENSP00000382245.2:p.Thr7PhefsTer7
ENST00000452111.5:c.18_21del ENSP00000408652.1:p.Thr7PhefsTer7
ENST00000467663.5:c.18_21del ENSP00000461056.1:p.Thr7PhefsTer7
ENST00000488623.5:n.282+2908_282+2911del
ENST00000495445.5:n.332_335del
ENST00000574218.1:c.-217+2908_-217+2911del ENSP00000458912.1:n.-217+2908_-217+2911de...
ENST00000574776.5:c.-156_-153del ENSP00000461118.1:n.-156_-153del
ENST00000576979.1:c.18_21del ENSP00000458457.1:p.Thr7PhefsTer7
NM_001031681.2:c.18_21del NP_001026851.2:p.Thr7PhefsTer7
NM_004937.2:c.18_21del NP_004928.2:p.Thr7PhefsTer7
XM_005256485.1:c.18_21del XP_005256542.1:p.Thr7PhefsTer7
XM_006721463.1:c.18_21del XP_006721526.1:p.Thr7PhefsTer7
XM_006721464.1:c.-339_-336del XP_006721527.1:n.-339_-336del
XM_011523691.1:c.18_21del XP_011521993.1:p.Thr7PhefsTer7
XM_011523692.1:c.-381+2908_-381+2911del XP_011521994.1:n.-381+2908_-381+2911del
XR_934003.1:n.611_614del
XM_005256485.3:c.18_21del XP_005256542.1:p.Thr7PhefsTer7
XM_006721463.3:c.18_21del XP_006721526.1:p.Thr7PhefsTer7
XM_006721464.2:c.-339_-336del XP_006721527.1:n.-339_-336del
XM_011523691.2:c.18_21del XP_011521993.1:p.Thr7PhefsTer7
XM_011523692.2:c.-381+2908_-381+2911del XP_011521994.1:n.-381+2908_-381+2911del
XM_017024254.1:c.-260_-257del XP_016879743.1:n.-260_-257del
XM_017024255.1:c.-339_-336del XP_016879744.1:n.-339_-336del
XM_017024256.1:c.-381+2908_-381+2911del XP_016879745.1:n.-381+2908_-381+2911del
XM_017024257.1:c.-260_-257del XP_016879746.1:n.-260_-257del
XM_017024258.1:c.-296+2908_-296+2911del XP_016879747.1:n.-296+2908_-296+2911del
XR_001752758.1:n.668-1140_668-1137del
XR_001752759.1:n.540-1140_540-1137del
XR_001752760.1:n.668-1268_668-1265del
XR_001752761.2:n.453-1140_453-1137del
XR_002958115.1:n.355-1140_355-1137del
NM_001374492.1:c.18_21del NP_001361421.1:p.Thr7PhefsTer7
NM_001374493.1:c.-339_-336del NP_001361422.1:n.-339_-336del
NM_001374494.1:c.-381+2908_-381+2911del NP_001361423.1:n.-381+2908_-381+2911del
NM_001374495.1:c.-260_-257del NP_001361424.1:n.-260_-257del
NM_001374496.1:c.-296+2908_-296+2911del NP_001361425.1:n.-296+2908_-296+2911del
NM_004937.3:c.18_21del MANE Select NP_004928.2:p.Thr7PhefsTer7
NM_001031681.3:c.18_21del NP_001026851.2:p.Thr7PhefsTer7