Canonical Allele Identifier: CA2647207262

Gene: PTPN22 AP4B1-AS1

Linked Data

• gnomAD v4: 1-113834465-TTCTTAAGAA-T

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.113834467_113834475del , CM000663.2:g.113834467_113834475del	GRCh38
NC_000001.10:g.114377089_114377097del , CM000663.1:g.114377089_114377097del	GRCh37
NC_000001.9:g.114178612_114178620del	NCBI36
NG_011432.1:g.42280_42288del

Transcript Alleles

HGVS	Amino-acid Change
ENST00000359785.10:c.1895-35_1895-27del (PTPN22) MANE Select	ENSP00000352833.5:n.1895-35_1895-27del
ENST00000359785.9:c.1895-35_1895-27del (PTPN22)	ENSP00000352833.5:n.1895-35_1895-27del
ENST00000420377.6:c.1895-35_1895-27del (PTPN22)	ENSP00000388229.2:n.1895-35_1895-27del
ENST00000460620.5:c.469-14820_469-14812del (PTPN22)	ENSP00000433141.1:n.469-14820_469-14812del
ENST00000484147.5:n.1936-35_1936-27del (PTPN22)
ENST00000525799.1:c.1514-35_1514-27del (PTPN22)	ENSP00000432674.1:n.1514-35_1514-27del
ENST00000528414.5:c.1730-35_1730-27del (PTPN22)	ENSP00000435176.1:n.1730-35_1730-27del
ENST00000532224.5:c.*1173-35_*1173-27del (PTPN22)	ENSP00000431249.1:n.*1173-35_*1173-27del
ENST00000538253.5:c.1823-35_1823-27del (PTPN22)	ENSP00000439372.2:n.1823-35_1823-27del
NM_001193431.1:c.1895-35_1895-27del (PTPN22)	NP_001180360.1:n.1895-35_1895-27del
NM_001193431.2:c.1895-35_1895-27del (PTPN22)	NP_001180360.1:n.1895-35_1895-27del
NM_001308297.1:c.1823-35_1823-27del (PTPN22)	NP_001295226.1:n.1823-35_1823-27del
NM_012411.4:c.1730-35_1730-27del (PTPN22)	NP_036543.4:n.1730-35_1730-27del
NM_012411.5:c.1730-35_1730-27del (PTPN22)	NP_036543.4:n.1730-35_1730-27del
NM_015967.5:c.1895-35_1895-27del (PTPN22)	NP_057051.3:n.1895-35_1895-27del
NM_015967.6:c.1895-35_1895-27del (PTPN22)	NP_057051.3:n.1895-35_1895-27del
NR_125965.1:n.414+18995_414+19003del (AP4B1-AS1)
XM_011541221.1:c.1817-35_1817-27del (PTPN22)	XP_011539523.1:n.1817-35_1817-27del
XM_011541222.1:c.1895-35_1895-27del (PTPN22)	XP_011539524.1:n.1895-35_1895-27del
XM_011541223.1:c.1895-35_1895-27del (PTPN22)	XP_011539525.1:n.1895-35_1895-27del
XM_011541224.1:c.1451-35_1451-27del (PTPN22)	XP_011539526.1:n.1451-35_1451-27del
XM_011541225.1:c.1823-35_1823-27del (PTPN22)	XP_011539527.1:n.1823-35_1823-27del
XM_011541223.2:c.1895-35_1895-27del (PTPN22)	XP_011539525.1:n.1895-35_1895-27del
XM_011541225.2:c.1823-35_1823-27del (PTPN22)	XP_011539527.1:n.1823-35_1823-27del
XM_017001004.1:c.1895-35_1895-27del (PTPN22)	XP_016856493.1:n.1895-35_1895-27del
XM_017001005.2:c.1550-35_1550-27del (PTPN22)	XP_016856494.1:n.1550-35_1550-27del
NM_015967.7:c.1895-35_1895-27del (PTPN22)	NP_057051.3:n.1895-35_1895-27del
NM_015967.8:c.1895-35_1895-27del (PTPN22) MANE Select	NP_057051.4:n.1895-35_1895-27del