Canonical Allele Identifier: CA263964
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 56593
dbSNP Id: rs386834024
gnomAD v2: 1-46655129-C-A
gnomAD v3: 1-46189457-C-A
gnomAD v4: 1-46189457-C-A

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46189457C>A , CM000663.2:g.46189457C>A GRCh38
NC_000001.10:g.46655129C>A , CM000663.1:g.46655129C>A GRCh37
NC_000001.9:g.46427716C>A NCBI36
NG_009205.2:g.35849G>T
NG_009205.3:g.35849G>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1895+1G>T (POMGNT1) ENSP00000379698.4:n.1895+1G>T
ENST00000497439.6:n.2067+1G>T (POMGNT1)
ENST00000684817.1:n.2255+1G>T (POMGNT1)
ENST00000684898.1:n.2458G>T (POMGNT1)
ENST00000685230.1:c.*1205+1G>T (POMGNT1) ENSP00000510305.1:n.*1205+1G>T
ENST00000685275.1:n.2442+1G>T (POMGNT1)
ENST00000685444.1:c.1796+1G>T (POMGNT1) ENSP00000510762.1:n.1796+1G>T
ENST00000685704.1:n.2561+1G>T (POMGNT1)
ENST00000685833.1:n.4288+1G>T (POMGNT1)
ENST00000686252.1:n.2969+1G>T (POMGNT1)
ENST00000686379.1:c.*1019+1G>T (POMGNT1) ENSP00000508913.1:n.*1019+1G>T
ENST00000686724.1:n.3582+1G>T (POMGNT1)
ENST00000686737.1:c.1895+1G>T (POMGNT1) ENSP00000508736.1:n.1895+1G>T
ENST00000687112.1:n.2761+1G>T (POMGNT1)
ENST00000687149.1:c.1934+1G>T (POMGNT1) ENSP00000509745.1:n.1934+1G>T
ENST00000687197.1:c.*835+1G>T (POMGNT1) ENSP00000510749.1:n.*835+1G>T
ENST00000687235.1:n.3972+1G>T (POMGNT1)
ENST00000687613.1:n.2535+1G>T (POMGNT1)
ENST00000687683.1:c.1895+1G>T (POMGNT1) ENSP00000508522.1:n.1895+1G>T
ENST00000688032.1:n.2432+1G>T (POMGNT1)
ENST00000688596.1:n.2546+1G>T (POMGNT1)
ENST00000688608.1:c.1796+1G>T (POMGNT1) ENSP00000508890.1:n.1796+1G>T
ENST00000689031.1:n.2347+1G>T (POMGNT1)
ENST00000689756.1:c.*1527+1G>T (POMGNT1) ENSP00000509023.1:n.*1527+1G>T
ENST00000690377.1:n.2242+1G>T (POMGNT1)
ENST00000690678.1:c.1895+1G>T (POMGNT1) ENSP00000508703.1:n.1895+1G>T
ENST00000691185.1:n.366+1G>T (POMGNT1)
ENST00000691209.1:c.*835+1G>T (POMGNT1) ENSP00000510112.1:n.*835+1G>T
ENST00000691243.1:c.*286+1G>T (POMGNT1) ENSP00000510654.1:n.*286+1G>T
ENST00000692202.1:n.2470+1G>T (POMGNT1)
ENST00000692322.1:c.*1683G>T (POMGNT1) ENSP00000509017.1:n.*1683G>T
ENST00000692369.1:c.1895+1G>T (POMGNT1) ENSP00000508453.1:n.1895+1G>T
ENST00000692599.1:n.3770+1G>T (POMGNT1)
ENST00000692635.1:c.*770+1G>T (POMGNT1) ENSP00000508425.1:n.*770+1G>T
ENST00000693168.1:n.3671+1G>T (POMGNT1)
ENST00000693218.1:c.*456+1G>T (POMGNT1) ENSP00000510577.1:n.*456+1G>T
ENST00000693223.1:n.2843+1G>T (POMGNT1)
ENST00000371984.8:c.1895+1G>T (POMGNT1) MANE Select ENSP00000361052.3:n.1895+1G>T
ENST00000371984.7:c.1895+1G>T (POMGNT1) ENSP00000361052.3:n.1895+1G>T
ENST00000371992.1:c.1869+27G>T (POMGNT1) ENSP00000361060.1:n.1869+27G>T
ENST00000396420.7:c.*1564+1G>T (POMGNT1) ENSP00000379698.3:n.*1564+1G>T
ENST00000475642.1:n.110+1G>T (POMGNT1)
NM_001243766.1:c.1869+27G>T (POMGNT1) NP_001230695.1:n.1869+27G>T
NM_001290129.1:c.1829+1G>T (POMGNT1) NP_001277058.1:n.1829+1G>T
NM_001290130.1:c.1466+1G>T (POMGNT1) NP_001277059.1:n.1466+1G>T
NM_017739.3:c.1895+1G>T (POMGNT1) NP_060209.3:n.1895+1G>T
XM_005271010.1:c.1895+1G>T (POMGNT1) XP_005271067.1:n.1895+1G>T
XM_006710755.1:c.1895+1G>T (POMGNT1) XP_006710818.1:n.1895+1G>T
XM_006710756.1:c.1869+27G>T (POMGNT1) XP_006710819.1:n.1869+27G>T
XM_011540460.1:c.678+4149C>A (TSPAN1) XP_011538762.1:n.678+4149C>A
XM_011540461.1:c.633+4149C>A (TSPAN1) XP_011538763.1:n.633+4149C>A
XM_011541759.1:c.1829+1G>T (POMGNT1) XP_011540061.1:n.1829+1G>T
XM_011541760.1:c.1829+1G>T (POMGNT1) XP_011540062.1:n.1829+1G>T
XM_011541761.1:c.803+1G>T (POMGNT1) XP_011540063.1:n.803+1G>T
XM_011540460.3:c.678+4149C>A (TSPAN1) XP_011538762.1:n.678+4149C>A
XM_011541760.3:c.1829+1G>T (POMGNT1) XP_011540062.1:n.1829+1G>T
XM_017001690.1:c.1895+1G>T (POMGNT1) XP_016857179.1:n.1895+1G>T
NM_001243766.2:c.1869+27G>T (POMGNT1) NP_001230695.2:n.1869+27G>T
NM_001290129.2:c.1829+1G>T (POMGNT1) NP_001277058.2:n.1829+1G>T
NM_001290130.2:c.1466+1G>T (POMGNT1) NP_001277059.2:n.1466+1G>T
NM_017739.4:c.1895+1G>T (POMGNT1) MANE Select NP_060209.4:n.1895+1G>T