Canonical Allele Identifier: CA2580614386
Gene: SCN1A HGNC NCBI

Linked Data

ClinVar Variation Id: 1072727
ClinVar RCV Id: RCV001385512
dbSNP Id: rs2105591602

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.166012122_166012124del , CM000664.2:g.166012122_166012124del GRCh38
NC_000002.11:g.166868632_166868634del , CM000664.1:g.166868632_166868634del GRCh37
NC_000002.10:g.166576878_166576880del NCBI36
NG_011906.1:g.66519_66521del , LRG_8:g.66519_66521del

Transcript Alleles

HGVS Amino-acid change
ENST00000689288.1:c.*1903_*1905del ENSP00000509637.1:n.*1903_*1905del
ENST00000303395.9:c.3867_3869del ENSP00000303540.4:p.Phe1289del
ENST00000635750.1:c.3834_3836del ENSP00000490799.1:p.Phe1278del
ENST00000635776.1:c.3834_3836del ENSP00000490692.1:p.Phe1278del
ENST00000636194.1:c.*1360_*1362del ENSP00000490288.1:n.*1360_*1362del
ENST00000637038.1:c.665_667del
ENST00000637968.1:n.4119_4121del
ENST00000637988.1:c.3834_3836del ENSP00000490780.1:p.Phe1278del
ENST00000640036.1:c.3834_3836del ENSP00000491573.1:p.Phe1278del
ENST00000641575.1:c.3831_3833del ENSP00000492917.1:p.Phe1277del
ENST00000641603.1:c.3867_3869del ENSP00000492945.1:p.Phe1289del
ENST00000641996.1:c.*3421_*3423del ENSP00000493054.1:n.*3421_*3423del
ENST00000671940.1:c.*1810_*1812del ENSP00000500336.1:n.*1810_*1812del
ENST00000673490.1:n.6340_6342del
ENST00000674923.1:c.3867_3869del MANE Select ENSP00000501589.1:p.Phe1289del
ENST00000303395.8:c.3867_3869del ENSP00000303540.4:p.Phe1289del
ENST00000375405.7:c.3834_3836del ENSP00000364554.3:p.Phe1278del
ENST00000409050.1:c.3783_3785del ENSP00000386312.1:p.Phe1261del
ENST00000423058.6:c.3867_3869del ENSP00000407030.2:p.Phe1289del
NM_001165963.1:c.3867_3869del NP_001159435.1:p.Phe1289del
NM_001165964.1:c.3783_3785del NP_001159436.1:p.Phe1261del
NM_001202435.1:c.3867_3869del NP_001189364.1:p.Phe1289del
NM_006920.4:c.3834_3836del , LRG_8t1:c.3834_3836del NP_008851.3:p.Phe1278del
NR_110598.1:n.176-3491_176-3489del
XM_011511598.1:c.3867_3869del XP_011509900.1:p.Phe1289del
XM_011511599.1:c.3867_3869del XP_011509901.1:p.Phe1289del
XM_011511600.1:c.3867_3869del XP_011509902.1:p.Phe1289del
XM_011511601.1:c.3867_3869del XP_011509903.1:p.Phe1289del
XM_011511602.1:c.3867_3869del XP_011509904.1:p.Phe1289del
XM_011511603.1:c.3864_3866del XP_011509905.1:p.Phe1288del
XM_011511604.1:c.3834_3836del XP_011509906.1:p.Phe1278del
XM_011511605.1:c.3831_3833del XP_011509907.1:p.Phe1277del
XM_011511606.1:c.3783_3785del XP_011509908.1:p.Phe1261del
XM_011511607.1:c.3867_3869del XP_011509909.1:p.Phe1289del
XR_922981.1:n.4051_4053del
NM_001165963.2:c.3867_3869del NP_001159435.1:p.Phe1289del
NM_001165964.2:c.3783_3785del NP_001159436.1:p.Phe1261del
NM_001202435.2:c.3867_3869del NP_001189364.1:p.Phe1289del
NM_001353948.1:c.3867_3869del NP_001340877.1:p.Phe1289del
NM_001353949.1:c.3834_3836del NP_001340878.1:p.Phe1278del
NM_001353950.1:c.3834_3836del NP_001340879.1:p.Phe1278del
NM_001353951.1:c.3834_3836del NP_001340880.1:p.Phe1278del
NM_001353952.1:c.3834_3836del NP_001340881.1:p.Phe1278del
NM_001353954.1:c.3831_3833del NP_001340883.1:p.Phe1277del
NM_001353955.1:c.3831_3833del NP_001340884.1:p.Phe1277del
NM_001353957.1:c.3783_3785del NP_001340886.1:p.Phe1261del
NM_001353958.1:c.3783_3785del NP_001340887.1:p.Phe1261del
NM_001353960.1:c.3780_3782del NP_001340889.1:p.Phe1260del
NM_001353961.1:c.1425_1427del NP_001340890.1:p.Phe475del
NM_006920.5:c.3834_3836del NP_008851.3:p.Phe1278del
NR_148667.1:n.4239_4241del
XR_001738883.1:n.4253_4255del
XR_001738884.1:n.4225_4227del
NM_001165963.3:c.3867_3869del NP_001159435.1:p.Phe1289del
NM_001165964.3:c.3783_3785del NP_001159436.1:p.Phe1261del
NM_001202435.3:c.3867_3869del NP_001189364.1:p.Phe1289del
NM_001353948.2:c.3867_3869del NP_001340877.1:p.Phe1289del
NM_001353949.2:c.3834_3836del NP_001340878.1:p.Phe1278del
NM_001353950.2:c.3834_3836del NP_001340879.1:p.Phe1278del
NM_001353951.2:c.3834_3836del NP_001340880.1:p.Phe1278del
NM_001353952.2:c.3834_3836del NP_001340881.1:p.Phe1278del
NM_001353954.2:c.3831_3833del NP_001340883.1:p.Phe1277del
NM_001353955.2:c.3831_3833del NP_001340884.1:p.Phe1277del
NM_001353957.2:c.3783_3785del NP_001340886.1:p.Phe1261del
NM_001353958.2:c.3783_3785del NP_001340887.1:p.Phe1261del
NM_001353960.2:c.3780_3782del NP_001340889.1:p.Phe1260del
NM_001353961.2:c.1425_1427del NP_001340890.1:p.Phe475del
NM_006920.6:c.3834_3836del NP_008851.3:p.Phe1278del
NR_148667.2:n.4220_4222del
NM_001165963.4:c.3867_3869del MANE Select NP_001159435.1:p.Phe1289del