Canonical Allele Identifier: CA2580573343
Gene: HLA-A HGNC NCBI

Genomic Alleles

HGVS Genome Assembly
NC_000006.12:g.[29942594C>T;29942863C>T;29942965G>C;29942982T>A;29942984G>A;29942985A>G;29942990G>C;29942994C>T;29942996C>G;29942997T>C;29943000G>T;29943002G>C;29943287A>G;29943309T>C;29943321T>C;29943337G>A;29943372C>T;29943426A>C;29943448A>G;29943451A>T;29943479T>G;29944124C>G;29944135A>G;29944144C>T;29944151C>G;29944153C>T;29944154A>G;29944193G>A;29944264C>T;29944310G>T;29944331G>C;29944503T>C;29944549G>A;29944556C>T;29944565G>A;29944568A>T;29944571A>G;29944591C>T;29944596T>G;29945075T>C;29945079A>T;29945260G>A;29945265C>T] , CM000668.2:g.[29942594C>T;29942863C>T;29942965G>C;29942982T>A;29942984G>A;29942985A>G;29942990G>C;29942994C>T;29942996C>G;29942997T>C;29943000G>T;29943002G>C;29943287A>G;29943309T>C;29943321T>C;29943337G>A;29943372C>T;29943426A>C;29943448A>G;29943451A>T;29943479T>G;29944124C>G;29944135A>G;29944144C>T;29944151C>G;29944153C>T;29944154A>G;29944193G>A;29944264C>T;29944310G>T;29944331G>C;29944503T>C;29944549G>A;29944556C>T;29944565G>A;29944568A>T;29944571A>G;29944591C>T;29944596T>G;29945075T>C;29945079A>T;29945260G>A;29945265C>T] GRCh38
NC_000006.11:g.[29910371C>T;29910640C>T;29910742G>C;29910759T>A;29910761G>A;29910762A>G;29910767G>C;29910771C>T;29910773C>G;29910774T>C;29910777G>T;29910779G>C;29911064A>G;29911086T>C;29911098T>C;29911114G>A;29911149C>T;29911203A>C;29911225A>G;29911228A>T;29911256T>G;29911901C>G;29911912A>G;29911921C>T;29911928C>G;29911930C>T;29911931A>G;29911970G>A;29912041C>T;29912087G>T;29912108G>C;29912280T>C;29912326G>A;29912333C>T;29912342G>A;29912345A>T;29912348A>G;29912368C>T;29912373T>G;29912852T>C;29912856A>T;29913037G>A;29913042C>T] , CM000668.1:g.[29910371C>T;29910640C>T;29910742G>C;29910759T>A;29910761G>A;29910762A>G;29910767G>C;29910771C>T;29910773C>G;29910774T>C;29910777G>T;29910779G>C;29911064A>G;29911086T>C;29911098T>C;29911114G>A;29911149C>T;29911203A>C;29911225A>G;29911228A>T;29911256T>G;29911901C>G;29911912A>G;29911921C>T;29911928C>G;29911930C>T;29911931A>G;29911970G>A;29912041C>T;29912087G>T;29912108G>C;29912280T>C;29912326G>A;29912333C>T;29912342G>A;29912345A>T;29912348A>G;29912368C>T;29912373T>G;29912852T>C;29912856A>T;29913037G>A;29913042C>T] GRCh37
NC_000006.10:g.[30018350C>T;30018619C>T;30018721G>C;30018738T>A;30018740G>A;30018741A>G;30018746G>C;30018750C>T;30018752C>G;30018753T>C;30018756G>T;30018758G>C;30019043A>G;30019065T>C;30019077T>C;30019093G>A;30019128C>T;30019182A>C;30019204A>G;30019207A>T;30019235T>G;30019880C>G;30019891A>G;30019900C>T;30019907C>G;30019909C>T;30019910A>G;30019949G>A;30020020C>T;30020066G>T;30020087G>C;30020259T>C;30020305G>A;30020312C>T;30020321G>A;30020324A>T;30020327A>G;30020347C>T;30020352T>G;30020831T>C;30020835A>T;30021016G>A;30021021C>T] NCBI36

Transcript Alleles

HGVS Amino-acid Change
ENST00000638375.2:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;895+106T>C;895+152G>A;895+159C>T;895+168G>A;895+171A>T;895+174A>G;895+194C>T;895+199T>G;912T>C;916A>T;955G>A;960C>T] ENSP00000492789.2:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000706892.1:n.[317C>T;456C>T;558G>C;575T>A;577G>A;578A>G;583G>C;587C>T;589C>G;590T>C;593G>T;595G>C;639A>G;661T>C;673T>C;689G>A;724C>T;778A>C;800A>G;803A>T;831T>G;1476C>G;1487A>G;1496C>T;1503C>G;1505C>T;1506A>G;1545G>A;1616C>T;1662G>T;1683G>C;1855T>C;1901G>A;1908C>T;1917G>A;1920A>T;1923A>G;1943C>T;1948T>G;2427T>C;2431A>T;2612G>A;2617C>T]
ENST00000706893.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;933T>C;979G>A;986C>T;995G>A;998A>T;1001A>G;1021C>T;1026T>G;*13T>C;*17A>T;*56G>A;*61C>T] ENSP00000516609.1:[p.Ser14Leu;p.Phe60=;p.Gln94His;p.Val100_As...
ENST00000706894.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] ENSP00000516610.1:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000706895.1:n.[317C>T;456C>T;558G>C;575T>A;577G>A;578A>G;583G>C;587C>T;589C>G;590T>C;593G>T;595G>C;639A>G;661T>C;673T>C;689G>A;724C>T;778A>C;800A>G;803A>T;831T>G;898C>G;909A>G;918C>T;925C>G;927C>T;928A>G;967G>A;1038C>T;1084G>T;1105G>C;1277T>C;1323G>A;1330C>T;1339G>A;1342A>T;1345A>G;1365C>T;1370T>G;1849T>C;1853A>T;1892G>A;1897C>T]
ENST00000706896.1:n.[317C>T;456C>T;558G>C;575T>A;577G>A;578A>G;583G>C;587C>T;589C>G;590T>C;593G>T;595G>C;639A>G;661T>C;673T>C;689G>A;724C>T;778A>C;800A>G;803A>T;831T>G;1476C>G;1487A>G;1496C>T;1503C>G;1505C>T;1506A>G;1545G>A;1616C>T;1662G>T;1683G>C;1753T>C;1799G>A;1806C>T;1815G>A;1818A>T;1821A>G;1841C>T;1846T>G;2325T>C;2329A>T;2368G>A;2373C>T]
ENST00000706897.1:n.[317C>T;456C>T;558G>C;575T>A;577G>A;578A>G;583G>C;587C>T;589C>G;590T>C;593G>T;595G>C;639A>G;661T>C;673T>C;689G>A;724C>T;778A>C;800A>G;803A>T;831T>G;898C>G;909A>G;918C>T;925C>G;927C>T;928A>G;967G>A;1038C>T;1084G>T;1105G>C;1175T>C;1221G>A;1228C>T;1237G>A;1240A>T;1243A>G;1263C>T;1268T>G;1747T>C;1751A>T;1790G>A;1795C>T]
ENST00000706898.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1047T>C;1051A>T;1090G>A;1095C>T] ENSP00000516611.1:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000706899.1:n.[317C>T;456C>T;558G>C;575T>A;577G>A;578A>G;583G>C;587C>T;589C>G;590T>C;593G>T;595G>C;639A>G;661T>C;673T>C;689G>A;724C>T;778A>C;800A>G;803A>T;831T>G;1476C>G;1487A>G;1496C>T;1503C>G;1505C>T;1506A>G;1545G>A;1616C>T;1662G>T;1683G>C;1753T>C;1799G>A;1806C>T;1815G>A;1818A>T;1821A>G;1841C>T;1846T>G;1883T>C;1887A>T;1926G>A;1931C>T]
ENST00000706901.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] ENSP00000516612.1:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000706902.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] ENSP00000516613.1:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000706903.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] ENSP00000516614.1:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000706904.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] ENSP00000516615.1:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000706905.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] ENSP00000516616.1:p.[Ser14Leu;Phe60=;Gln94His;Val100Glu;Asp10...
ENST00000376809.10:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] MANE Select ENSP00000366005.5:p.[Ser14Leu;Phe60=;Gln94His;Val100Glu;Asp10...
ENST00000638375.1:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;895+106T>C;895+152G>A;895+159C>T;895+168G>A;895+171A>T;895+174A>G;895+194C>T;895+199T>G;912T>C;916A>T;955G>A;960C>T] ENSP00000492789.1:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000376802.2:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;895+106T>C;895+152G>A;895+159C>T;895+168G>A;895+171A>T;895+174A>G;895+194C>T;895+199T>G;896-376T>C;896-372A>T;896-191G>A;896-186C>T] ENSP00000365998.2:p.[Ser14Leu;Phe60=;Gln94His;Val100Glu;Asp10...
ENST00000376806.9:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1047T>C;1051A>T;1090G>A;1095C>T] ENSP00000366002.5:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000376809.9:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] ENSP00000366005.5:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101de...
ENST00000396634.5:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] ENSP00000379873.1:p.[Ser14Leu;Phe60=;Gln94His;Val100Glu;Asp10...
ENST00000461903.1:n.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;604A>G;626T>C;638T>C;654G>A;689C>T;743A>C;765A>G;768A>T;796T>G;863C>G;874A>G;883C>T;890C>G;892C>T;893A>G;932G>A;1003C>T;1049G>T;1070G>C;1140T>C;1186G>A;1193C>T;1202G>A;1205A>T;1208A>G;1228C>T;1233T>G;1288T>C;1292A>T;1331G>A;1336C>T]
ENST00000479320.5:n.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;604A>G;626T>C;638T>C;654G>A;689C>T;743A>C;765A>G;768A>T;796T>G;863C>G;874A>G;883C>T;890C>G;892C>T;893A>G;932G>A;1003C>T;1049G>T;1070G>C;1140T>C;1186G>A;1193C>T;1202G>A;1205A>T;1208A>G;1228C>T;1233T>G;1270T>C;1274A>T;1313G>A;1318C>T]
ENST00000495183.5:n.[43C>T;182C>T;284G>C;301T>A;303G>A;304A>G;309G>C;313C>T;315C>G;316T>C;319G>T;321G>C;606A>G;628T>C;640T>C;656G>A;691C>T;745A>C;767A>G;770A>T;798T>G;865C>G;876A>G;885C>T;892C>G;894C>T;895A>G;934G>A;1005C>T;1051G>T;1072G>C;1142T>C;1188G>A;1195C>T;1204G>A;1207A>T;1210A>G;1230C>T;1235T>G;1268T>C;1272A>T;1311G>A;1316C>T]
ENST00000496081.5:n.[47C>T;177+9C>T;177+111G>C;177+128T>A;177+130G>A;177+131A>G;177+136G>C;177+140C>T;177+142C>G;177+143T>C;177+146G>T;177+148G>C;180A>G;202T>C;214T>C;230G>A;265C>T;319A>C;341A>G;344A>T;372T>G;439C>G;450A>G;459C>T;466C>G;468C>T;469A>G;508G>A;579C>T;625G>T;646G>C;716T>C;762G>A;769C>T;778G>A;781A>T;784A>G;804C>T;809T>G;1288T>C;1292A>T;1331G>A;1336C>T]
NM_002116.7:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] NP_002107.3:p.[Ser14Leu;Phe60=;Gln94His;Val100_Asp101delinsAs...
NM_002116.8:c.[41C>T;180C>T;282G>C;299T>A;301G>A;302A>G;307G>C;311C>T;313C>G;314T>C;317G>T;319G>C;363A>G;385T>C;397T>C;413G>A;448C>T;502A>C;524A>G;527A>T;555T>G;622C>G;633A>G;642C>T;649C>G;651C>T;652A>G;691G>A;762C>T;808G>T;829G>C;899T>C;945G>A;952C>T;961G>A;964A>T;967A>G;987C>T;992T>G;1029T>C;1033A>T;1072G>A;1077C>T] MANE Select NP_002107.3:p.[Ser14Leu;Phe60=;Gln94His;Val100Glu;Asp101Ser;G...