Canonical Allele Identifier: CA2580076858
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1784312
ClinVar RCV Id: RCV002417249

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5986761dup , CM000669.2:g.5986761dup GRCh38
NC_000007.13:g.6026392dup , CM000669.1:g.6026392dup GRCh37
NC_000007.12:g.5992918dup NCBI36
NG_008466.1:g.27347dup , LRG_161:g.27347dup

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1401dup ENSP00000514615.2:n.*1401dup
ENST00000699840.2:c.2002dup ENSP00000514638.2:p.Ser668LysfsTer2
ENST00000699930.2:c.1897dup ENSP00000514695.2:p.Ser633LysfsTer2
ENST00000406569.8:c.1678+327dup ENSP00000514464.1:n.1678+327dup
ENST00000644110.2:c.*1599dup ENSP00000496392.2:n.*1599dup
ENST00000699752.1:c.1849dup ENSP00000514561.1:p.Ser617LysfsTer2
ENST00000699753.1:c.*1426dup ENSP00000514562.1:n.*1426dup
ENST00000699754.1:c.1807dup ENSP00000514563.1:p.Ser603LysfsTer2
ENST00000699755.1:c.*1404dup ENSP00000514564.1:n.*1404dup
ENST00000699756.1:c.*1592dup ENSP00000514565.1:n.*1592dup
ENST00000699757.1:c.*1262dup ENSP00000514566.1:n.*1262dup
ENST00000699758.1:c.*1262dup ENSP00000514567.1:n.*1262dup
ENST00000699759.1:n.2859dup
ENST00000699760.1:c.1687dup ENSP00000514568.1:p.Ser563LysfsTer2
ENST00000699761.1:c.1600dup ENSP00000514569.1:p.Ser534LysfsTer2
ENST00000699762.1:c.1432dup ENSP00000514570.1:p.Ser478LysfsTer2
ENST00000699763.1:c.*1095dup ENSP00000514571.1:n.*1095dup
ENST00000699764.1:c.*323dup ENSP00000514572.1:n.*323dup
ENST00000699765.1:c.*1101dup ENSP00000514573.1:n.*1101dup
ENST00000699766.1:c.2005dup ENSP00000514574.1:p.Ser669LysfsTer2
ENST00000699767.1:c.2005dup ENSP00000514575.1:p.Ser669LysfsTer2
ENST00000699768.1:c.2005dup ENSP00000514576.1:p.Ser669LysfsTer2
ENST00000699811.1:c.1600dup ENSP00000514614.1:p.Ser534LysfsTer2
ENST00000699813.1:n.2118dup
ENST00000699814.1:c.1628dup
ENST00000699815.1:c.*1536dup ENSP00000514616.1:n.*1536dup
ENST00000699816.1:c.*895dup ENSP00000514617.1:n.*895dup
ENST00000699817.1:c.*1599dup ENSP00000514618.1:n.*1599dup
ENST00000699818.1:c.1600dup ENSP00000514619.1:p.Ser534LysfsTer2
ENST00000699819.1:c.*1162dup ENSP00000514620.1:n.*1162dup
ENST00000699820.1:c.1144+3040dup ENSP00000514621.1:n.1144+3040dup
ENST00000699821.1:c.1600dup ENSP00000514622.1:p.Ser534LysfsTer2
ENST00000699822.1:c.*1457dup ENSP00000514623.1:n.*1457dup
ENST00000699823.1:c.1600dup ENSP00000514624.1:p.Ser534LysfsTer2
ENST00000699824.1:c.*1508dup ENSP00000514625.1:n.*1508dup
ENST00000699825.1:c.1444dup ENSP00000514626.1:p.Ser482LysfsTer2
ENST00000699826.1:c.*1404dup ENSP00000514627.1:n.*1404dup
ENST00000699827.1:c.1837dup ENSP00000514628.1:p.Ser613LysfsTer2
ENST00000699828.1:c.*1095dup ENSP00000514629.1:n.*1095dup
ENST00000699833.1:n.3777dup
ENST00000699837.1:c.1600dup ENSP00000514635.1:p.Ser534LysfsTer2
ENST00000699838.1:c.*1905dup ENSP00000514636.1:n.*1905dup
ENST00000699839.1:c.2191dup ENSP00000514637.1:p.Ser731LysfsTer2
ENST00000699916.1:c.*1262dup ENSP00000514684.1:n.*1262dup
ENST00000699917.1:c.*1454dup ENSP00000514685.1:n.*1454dup
ENST00000699918.1:c.*1506dup ENSP00000514686.1:n.*1506dup
ENST00000699919.1:c.*1592dup ENSP00000514687.1:n.*1592dup
ENST00000699920.1:c.*1641dup ENSP00000514688.1:n.*1641dup
ENST00000699928.1:c.989-3769dup ENSP00000514693.1:n.989-3769dup
ENST00000699951.1:c.*1101dup ENSP00000514706.1:n.*1101dup
ENST00000699952.1:c.803+10566dup ENSP00000514707.1:n.803+10566dup
ENST00000265849.12:c.2005dup MANE Select ENSP00000265849.7:p.Ser669LysfsTer2
ENST00000642292.1:c.1600dup ENSP00000495524.1:p.Ser534LysfsTer2
ENST00000642456.1:c.1600dup ENSP00000493814.1:p.Ser534LysfsTer2
ENST00000643595.1:c.*1404dup ENSP00000494497.1:n.*1404dup
ENST00000644110.1:c.1687dup ENSP00000496392.1:p.Ser563LysfsTer2
ENST00000265849.11:c.2005dup ENSP00000265849.7:p.Ser669LysfsTer2
ENST00000382321.5:c.804-3769dup ENSP00000371758.4:n.804-3769dup
ENST00000406569.7:n.1678+327dup
ENST00000441476.6:c.1687dup ENSP00000392843.2:p.Ser563LysfsTer2
ENST00000469652.1:n.63-3855dup
NM_000535.5:c.2005dup , LRG_161t1:c.2005dup NP_000526.1:p.Ser669LysfsTer2
NR_003085.2:n.2087dup
XM_006715742.2:c.1999dup XP_006715805.1:p.Ser667LysfsTer2
XM_006715744.2:c.1072dup XP_006715807.1:p.Ser358LysfsTer2
XM_011515427.1:c.2050dup XP_011513729.1:p.Ser684LysfsTer2
XM_011515428.1:c.1894dup XP_011513730.1:p.Ser632LysfsTer2
XM_011515429.1:c.1687dup XP_011513731.1:p.Ser563LysfsTer2
XM_011515430.1:c.1687dup XP_011513732.1:p.Ser563LysfsTer2
NM_000535.6:c.2005dup NP_000526.2:p.Ser669LysfsTer2
NM_001322003.1:c.1600dup NP_001308932.1:p.Ser534LysfsTer2
NM_001322004.1:c.1600dup NP_001308933.1:p.Ser534LysfsTer2
NM_001322005.1:c.1600dup NP_001308934.1:p.Ser534LysfsTer2
NM_001322006.1:c.1849dup NP_001308935.1:p.Ser617LysfsTer2
NM_001322007.1:c.1687dup NP_001308936.1:p.Ser563LysfsTer2
NM_001322008.1:c.1687dup NP_001308937.1:p.Ser563LysfsTer2
NM_001322009.1:c.1600dup NP_001308938.1:p.Ser534LysfsTer2
NM_001322010.1:c.1444dup NP_001308939.1:p.Ser482LysfsTer2
NM_001322011.1:c.1072dup NP_001308940.1:p.Ser358LysfsTer2
NM_001322012.1:c.1072dup NP_001308941.1:p.Ser358LysfsTer2
NM_001322013.1:c.1432dup NP_001308942.1:p.Ser478LysfsTer2
NM_001322014.1:c.2005dup NP_001308943.1:p.Ser669LysfsTer2
NM_001322015.1:c.1696dup NP_001308944.1:p.Ser566LysfsTer2
NR_136154.1:n.2092dup
XM_006715744.4:c.1072dup XP_006715807.1:p.Ser358LysfsTer2
XM_017012342.2:c.1072dup XP_016867831.1:p.Ser358LysfsTer2
XM_024446800.1:c.1444dup XP_024302568.1:p.Ser482LysfsTer2
NM_000535.7:c.2005dup MANE Select NP_000526.2:p.Ser669LysfsTer2
NM_001322003.2:c.1600dup NP_001308932.1:p.Ser534LysfsTer2
NM_001322004.2:c.1600dup NP_001308933.1:p.Ser534LysfsTer2
NM_001322005.2:c.1600dup NP_001308934.1:p.Ser534LysfsTer2
NM_001322006.2:c.1849dup NP_001308935.1:p.Ser617LysfsTer2
NM_001322008.2:c.1687dup NP_001308937.1:p.Ser563LysfsTer2
NM_001322009.2:c.1600dup NP_001308938.1:p.Ser534LysfsTer2
NM_001322010.2:c.1444dup NP_001308939.1:p.Ser482LysfsTer2
NM_001322011.2:c.1072dup NP_001308940.1:p.Ser358LysfsTer2
NM_001322012.2:c.1072dup NP_001308941.1:p.Ser358LysfsTer2
NM_001322013.2:c.1432dup NP_001308942.1:p.Ser478LysfsTer2
NM_001322014.2:c.2005dup NP_001308943.1:p.Ser669LysfsTer2
NM_001322015.2:c.1696dup NP_001308944.1:p.Ser566LysfsTer2
NM_001322007.2:c.1687dup NP_001308936.1:p.Ser563LysfsTer2