Canonical Allele Identifier: CA2580067035
Gene: MSH2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1782087
ClinVar RCV Id: RCV002408042

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47475157_47475167del , CM000664.2:g.47475157_47475167del GRCh38
NC_000002.11:g.47702296_47702306del , CM000664.1:g.47702296_47702306del GRCh37
NC_000002.10:g.47555800_47555810del NCBI36
NG_007110.2:g.77034_77044del , LRG_218:g.77034_77044del

Transcript Alleles

HGVS Amino-acid change
ENST00000644900.2:c.1892_1902del ENSP00000495641.2:p.Arg631LysfsTer9
ENST00000233146.7:c.1892_1902del MANE Select ENSP00000233146.2:p.Arg631LysfsTer9
ENST00000543555.6:c.1694_1704del ENSP00000442697.1:p.Arg565LysfsTer9
ENST00000644092.1:c.*192_*202del ENSP00000496351.1:n.*192_*202del
ENST00000645339.1:c.1892_1902del ENSP00000496441.1:p.Arg631LysfsTer9
ENST00000645506.1:c.1892_1902del ENSP00000495455.1:p.Arg631LysfsTer9
ENST00000646415.1:c.1892_1902del ENSP00000495543.1:p.Arg631LysfsTer9
ENST00000233146.6:c.1892_1902del ENSP00000233146.2:p.Arg631LysfsTer9
ENST00000406134.5:c.1892_1902del ENSP00000384199.1:p.Arg631LysfsTer9
ENST00000543555.5:c.1694_1704del ENSP00000442697.1:p.Arg565LysfsTer9
ENST00000610696.4:c.*288_*298del ENSP00000483159.1:n.*288_*298del
ENST00000613514.4:c.*432_*442del ENSP00000484137.1:n.*432_*442del
ENST00000617333.3:c.*658_*668del ENSP00000482468.1:n.*658_*668del
ENST00000617938.4:c.*864_*874del ENSP00000481158.1:n.*864_*874del
ENST00000621359.2:c.1892_1902del ENSP00000481416.1:p.Arg631LysfsTer9
NM_000251.2:c.1892_1902del , LRG_218t1:c.1892_1902del NP_000242.1:p.Arg631LysfsTer9
NM_001258281.1:c.1694_1704del NP_001245210.1:p.Arg565LysfsTer9
XM_005264332.2:c.1892_1902del XP_005264389.2:p.Arg631LysfsTer9
XM_011532867.1:c.1892_1902del XP_011531169.1:p.Arg631LysfsTer9
XR_939685.1:n.1964_1974del
XM_005264332.4:c.1892_1902del XP_005264389.2:p.Arg631LysfsTer9
XM_011532867.2:c.1892_1902del XP_011531169.1:p.Arg631LysfsTer9
XR_001738747.2:n.1954_1964del
XR_939685.2:n.1954_1964del
NM_000251.3:c.1892_1902del MANE Select NP_000242.1:p.Arg631LysfsTer9