Canonical Allele Identifier: CA2578823627
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1791250
ClinVar RCV Id: RCV002459958

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5977591_5977595del , CM000669.2:g.5977591_5977595del GRCh38
NC_000007.13:g.6017222_6017226del , CM000669.1:g.6017222_6017226del GRCh37
NC_000007.12:g.5983748_5983752del NCBI36
NG_008466.1:g.36512_36516del , LRG_161:g.36512_36516del

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1834_*1838del ENSP00000514615.2:n.*1834_*1838del
ENST00000699840.2:c.2435_2439del ENSP00000514638.2:p.Arg812LeufsTer9
ENST00000699930.2:c.2330_2334del ENSP00000514695.2:p.Arg777LeufsTer9
ENST00000406569.8:c.1798_1802del ENSP00000514464.1:n.1798_1802del
ENST00000644110.2:c.*2032_*2036del ENSP00000496392.2:n.*2032_*2036del
ENST00000699752.1:c.2282_2286del ENSP00000514561.1:p.Arg761LeufsTer9
ENST00000699753.1:c.*1859_*1863del ENSP00000514562.1:n.*1859_*1863del
ENST00000699754.1:c.2240_2244del ENSP00000514563.1:p.Arg747LeufsTer9
ENST00000699755.1:c.*1837_*1841del ENSP00000514564.1:n.*1837_*1841del
ENST00000699756.1:c.*2025_*2029del ENSP00000514565.1:n.*2025_*2029del
ENST00000699757.1:c.*1695_*1699del ENSP00000514566.1:n.*1695_*1699del
ENST00000699758.1:c.*1695_*1699del ENSP00000514567.1:n.*1695_*1699del
ENST00000699759.1:n.3292_3296del
ENST00000699760.1:c.2120_2124del ENSP00000514568.1:p.Arg707LeufsTer9
ENST00000699761.1:c.2033_2037del ENSP00000514569.1:p.Arg678LeufsTer9
ENST00000699762.1:c.1865_1869del ENSP00000514570.1:p.Arg622LeufsTer9
ENST00000699763.1:c.*1528_*1532del ENSP00000514571.1:n.*1528_*1532del
ENST00000699764.1:c.*756_*760del ENSP00000514572.1:n.*756_*760del
ENST00000699765.1:c.*1433_*1437del ENSP00000514573.1:n.*1433_*1437del
ENST00000699766.1:c.2471_2475del ENSP00000514574.1:p.Arg824LeufsTer9
ENST00000699767.1:c.*79_*83del ENSP00000514575.1:n.*79_*83del
ENST00000699768.1:c.2294_2298del ENSP00000514576.1:p.Arg765LeufsTer9
ENST00000699811.1:c.2033_2037del ENSP00000514614.1:p.Arg678LeufsTer9
ENST00000699813.1:n.2551_2555del
ENST00000699814.1:c.2061_2065del
ENST00000699815.1:c.*1969_*1973del ENSP00000514616.1:n.*1969_*1973del
ENST00000699816.1:c.*1328_*1332del ENSP00000514617.1:n.*1328_*1332del
ENST00000699817.1:c.*2032_*2036del ENSP00000514618.1:n.*2032_*2036del
ENST00000699818.1:c.2033_2037del ENSP00000514619.1:p.Arg678LeufsTer9
ENST00000699819.1:c.*1595_*1599del ENSP00000514620.1:n.*1595_*1599del
ENST00000699820.1:c.*376_*380del ENSP00000514621.1:n.*376_*380del
ENST00000699821.1:c.2066_2070del ENSP00000514622.1:p.Arg689LeufsTer9
ENST00000699822.1:c.*1890_*1894del ENSP00000514623.1:n.*1890_*1894del
ENST00000699823.1:c.2033_2037del ENSP00000514624.1:p.Arg678LeufsTer9
ENST00000699824.1:c.*1941_*1945del ENSP00000514625.1:n.*1941_*1945del
ENST00000699825.1:c.1877_1881del ENSP00000514626.1:p.Arg626LeufsTer9
ENST00000699826.1:c.*1837_*1841del ENSP00000514627.1:n.*1837_*1841del
ENST00000699827.1:c.2270_2274del ENSP00000514628.1:p.Arg757LeufsTer9
ENST00000699828.1:c.*1528_*1532del ENSP00000514629.1:n.*1528_*1532del
ENST00000699833.1:n.4210_4214del
ENST00000699837.1:c.2033_2037del ENSP00000514635.1:p.Arg678LeufsTer9
ENST00000699838.1:c.*2338_*2342del ENSP00000514636.1:n.*2338_*2342del
ENST00000699839.1:c.2624_2628del ENSP00000514637.1:p.Arg875LeufsTer9
ENST00000699916.1:c.*1695_*1699del ENSP00000514684.1:n.*1695_*1699del
ENST00000699917.1:c.*1887_*1891del ENSP00000514685.1:n.*1887_*1891del
ENST00000699918.1:c.*1939_*1943del ENSP00000514686.1:n.*1939_*1943del
ENST00000699919.1:c.*2025_*2029del ENSP00000514687.1:n.*2025_*2029del
ENST00000699920.1:c.*2074_*2078del ENSP00000514688.1:n.*2074_*2078del
ENST00000699928.1:c.*376_*380del ENSP00000514693.1:n.*376_*380del
ENST00000699951.1:c.*1491_*1495del ENSP00000514706.1:n.*1491_*1495del
ENST00000699952.1:c.804-4053_804-4049del ENSP00000514707.1:n.804-4053_804-4049del
ENST00000265849.12:c.2438_2442del MANE Select ENSP00000265849.7:p.Arg813LeufsTer9
ENST00000642292.1:c.2033_2037del ENSP00000495524.1:p.Arg678LeufsTer9
ENST00000642456.1:c.2033_2037del ENSP00000493814.1:p.Arg678LeufsTer9
ENST00000643595.1:c.*1837_*1841del ENSP00000494497.1:n.*1837_*1841del
ENST00000644110.1:c.2120_2124del ENSP00000496392.1:p.Arg707LeufsTer9
ENST00000265849.11:c.2438_2442del ENSP00000265849.7:p.Arg813LeufsTer9
ENST00000382321.5:c.1235_1239del ENSP00000371758.4:p.Arg412LeufsTer9
ENST00000441476.6:c.2120_2124del ENSP00000392843.2:p.Arg707LeufsTer9
NM_000535.5:c.2438_2442del , LRG_161t1:c.2438_2442del NP_000526.1:p.Arg813LeufsTer9
NR_003085.2:n.2520_2524del
XM_006715742.2:c.2432_2436del XP_006715805.1:p.Arg811LeufsTer9
XM_006715744.2:c.1505_1509del XP_006715807.1:p.Arg502LeufsTer9
XM_011515427.1:c.2483_2487del XP_011513729.1:p.Arg828LeufsTer9
XM_011515428.1:c.2327_2331del XP_011513730.1:p.Arg776LeufsTer9
XM_011515429.1:c.2120_2124del XP_011513731.1:p.Arg707LeufsTer9
XM_011515430.1:c.2120_2124del XP_011513732.1:p.Arg707LeufsTer9
NM_000535.6:c.2438_2442del NP_000526.2:p.Arg813LeufsTer9
NM_001322003.1:c.2033_2037del NP_001308932.1:p.Arg678LeufsTer9
NM_001322004.1:c.2033_2037del NP_001308933.1:p.Arg678LeufsTer9
NM_001322005.1:c.2033_2037del NP_001308934.1:p.Arg678LeufsTer9
NM_001322006.1:c.2282_2286del NP_001308935.1:p.Arg761LeufsTer9
NM_001322007.1:c.2120_2124del NP_001308936.1:p.Arg707LeufsTer9
NM_001322008.1:c.2120_2124del NP_001308937.1:p.Arg707LeufsTer9
NM_001322009.1:c.2066_2070del NP_001308938.1:p.Arg689LeufsTer9
NM_001322010.1:c.1877_1881del NP_001308939.1:p.Arg626LeufsTer9
NM_001322011.1:c.1505_1509del NP_001308940.1:p.Arg502LeufsTer9
NM_001322012.1:c.1505_1509del NP_001308941.1:p.Arg502LeufsTer9
NM_001322013.1:c.1865_1869del NP_001308942.1:p.Arg622LeufsTer9
NM_001322014.1:c.2471_2475del NP_001308943.1:p.Arg824LeufsTer9
NM_001322015.1:c.2129_2133del NP_001308944.1:p.Arg710LeufsTer9
NR_136154.1:n.2482_2486del
XM_006715744.4:c.1505_1509del XP_006715807.1:p.Arg502LeufsTer9
XM_017012342.2:c.1505_1509del XP_016867831.1:p.Arg502LeufsTer9
XM_024446800.1:c.1877_1881del XP_024302568.1:p.Arg626LeufsTer9
NM_000535.7:c.2438_2442del MANE Select NP_000526.2:p.Arg813LeufsTer9
NM_001322003.2:c.2033_2037del NP_001308932.1:p.Arg678LeufsTer9
NM_001322004.2:c.2033_2037del NP_001308933.1:p.Arg678LeufsTer9
NM_001322005.2:c.2033_2037del NP_001308934.1:p.Arg678LeufsTer9
NM_001322006.2:c.2282_2286del NP_001308935.1:p.Arg761LeufsTer9
NM_001322008.2:c.2120_2124del NP_001308937.1:p.Arg707LeufsTer9
NM_001322009.2:c.2066_2070del NP_001308938.1:p.Arg689LeufsTer9
NM_001322010.2:c.1877_1881del NP_001308939.1:p.Arg626LeufsTer9
NM_001322011.2:c.1505_1509del NP_001308940.1:p.Arg502LeufsTer9
NM_001322012.2:c.1505_1509del NP_001308941.1:p.Arg502LeufsTer9
NM_001322013.2:c.1865_1869del NP_001308942.1:p.Arg622LeufsTer9
NM_001322014.2:c.2471_2475del NP_001308943.1:p.Arg824LeufsTer9
NM_001322015.2:c.2129_2133del NP_001308944.1:p.Arg710LeufsTer9
NM_001322007.2:c.2120_2124del NP_001308936.1:p.Arg707LeufsTer9