Canonical Allele Identifier: CA16604583

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 378168
• ClinVar RCV Id: RCV001013927 ; RCV001397729 ; RCV001718850
• dbSNP Id: rs1057520324
• gnomAD v4: 2-47799972-T-C
• MyVariant Identifiers: chr2:g.48027111T>C (hg19) ; chr2:g.47799972T>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47799972T>C , CM000664.2:g.47799972T>C	GRCh38
NC_000002.11:g.48027111T>C , CM000664.1:g.48027111T>C	GRCh37
NC_000002.10:g.47880615T>C	NCBI36
NG_007111.1:g.21826T>C , LRG_219:g.21826T>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.1692T>C (MSH6)	ENSP00000406248.2:p.Thr564=
ENST00000420813.6:c.1692T>C (MSH6)	ENSP00000390382.2:p.Thr564=
ENST00000455383.6:c.1692T>C (MSH6)	ENSP00000397484.2:p.Thr564=
ENST00000700004.2:c.1989T>C (MSH6)	ENSP00000514752.2:p.Thr663=
ENST00000699999.1:n.2073T>C (MSH6)
ENST00000700000.1:c.1606+383T>C (MSH6)	ENSP00000514749.1:n.1606+383T>C
ENST00000700002.1:c.1995T>C (MSH6)	ENSP00000514750.1:p.Thr665=
ENST00000700003.1:c.628-3448T>C (MSH6)	ENSP00000514751.1:n.628-3448T>C
ENST00000700004.1:c.1146T>C (MSH6)	ENSP00000514752.1:p.Thr382=
ENST00000234420.11:c.1989T>C (MSH6) MANE Select	ENSP00000234420.5:p.Thr663=
ENST00000540021.6:c.1599T>C (MSH6)	ENSP00000446475.1:p.Thr533=
ENST00000652107.1:c.1692T>C (MSH6)	ENSP00000498629.1:p.Thr564=
ENST00000673637.1:c.1692T>C (MSH6)	ENSP00000501310.1:p.Thr564=
ENST00000234420.9:c.1989T>C (MSH6)	ENSP00000234420.4:p.Thr663=
ENST00000405808.5:c.169+8223A>G (FBXO11)	ENSP00000385127.1:n.169+8223A>G
ENST00000434234.5:c.*124+8022A>G (FBXO11)	ENSP00000402692.1:n.*124+8022A>G
ENST00000445503.5:c.*1336T>C (MSH6)	ENSP00000405294.1:n.*1336T>C
ENST00000538136.1:c.1083T>C (MSH6)	ENSP00000438580.1:p.Thr361=
ENST00000540021.5:c.1599T>C (MSH6)	ENSP00000446475.1:p.Thr533=
ENST00000614496.4:c.1083T>C (MSH6)	ENSP00000477844.1:p.Thr361=
ENST00000616033.4:c.1986T>C (MSH6)	ENSP00000480261.1:p.Thr662=
ENST00000622629.4:c.-1108T>C (MSH6)	ENSP00000482078.1:n.-1108T>C
NM_000179.2:c.1989T>C , LRG_219t1:c.1989T>C (MSH6)	NP_000170.1:p.Thr663=
NM_001281492.1:c.1599T>C (MSH6)	NP_001268421.1:p.Thr533=
NM_001281493.1:c.1083T>C (MSH6)	NP_001268422.1:p.Thr361=
NM_001281494.1:c.1083T>C (MSH6)	NP_001268423.1:p.Thr361=
XM_005264271.1:c.1692T>C (MSH6)	XP_005264328.1:p.Thr564=
XM_011532798.1:c.1806T>C (MSH6)	XP_011531100.1:p.Thr602=
XM_011532799.1:c.1692T>C (MSH6)	XP_011531101.1:p.Thr564=
XM_011532800.1:c.1692T>C (MSH6)	XP_011531102.1:p.Thr564=
XM_024452819.1:c.1989T>C (MSH6)	XP_024308587.1:p.Thr663=
XM_024452820.1:c.1806T>C (MSH6)	XP_024308588.1:p.Thr602=
XM_024452821.1:c.1692T>C (MSH6)	XP_024308589.1:p.Thr564=
XM_024452822.1:c.1083T>C (MSH6)	XP_024308590.1:p.Thr361=
NM_000179.3:c.1989T>C (MSH6) MANE Select	NP_000170.1:p.Thr663=
NM_001281492.2:c.1599T>C (MSH6)	NP_001268421.1:p.Thr533=
NM_001281493.2:c.1083T>C (MSH6)	NP_001268422.1:p.Thr361=
NM_001281494.2:c.1083T>C (MSH6)	NP_001268423.1:p.Thr361=