Canonical Allele Identifier: CA155061

Gene: SCN2A

Linked Data

• ClinVar Variation Id: 130220
• ClinVar RCV Id: RCV000118256 ; RCV001265280
• dbSNP Id: rs587780450
• MyVariant Identifiers: chr2:g.166211156del (hg19) ; chr2:g.165354646del (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.165354646del , CM000664.2:g.165354646del	GRCh38
NC_000002.11:g.166211156del , CM000664.1:g.166211156del	GRCh37
NC_000002.10:g.165919402del	NCBI36
NG_008143.1:g.120245del

Transcript Alleles

HGVS	Amino-acid change
ENST00000631182.3:c.3374del MANE Plus Clinical	ENSP00000486885.1:p.Glu1125GlyfsTer11
ENST00000375437.7:c.3374del MANE Select	ENSP00000364586.2:p.Glu1125GlyfsTer11
ENST00000636071.2:c.3374del	ENSP00000490107.1:p.Glu1125GlyfsTer11
ENST00000636135.1:c.*1693del	ENSP00000489821.1:n.*1693del
ENST00000636384.2:c.*1361del	ENSP00000490765.1:n.*1361del
ENST00000636662.2:c.*3897del	ENSP00000489873.1:n.*3897del
ENST00000636769.1:c.*1316del	ENSP00000490800.1:n.*1316del
ENST00000636985.2:c.2978del	ENSP00000490849.1:p.Glu993GlyfsTer11
ENST00000637266.2:c.3374del	ENSP00000490866.1:p.Glu1125GlyfsTer11
ENST00000673831.1:c.1120del	ENSP00000501305.1:n.1120del
ENST00000673883.1:c.939del	ENSP00000501309.1:n.939del
ENST00000674133.1:c.1225del
ENST00000283256.10:c.3374del	ENSP00000283256.6:p.Glu1125GlyfsTer11
ENST00000375427.4:c.3374del	ENSP00000364576.2:p.Glu1125GlyfsTer11
ENST00000375437.6:c.3374del	ENSP00000364586.2:p.Glu1125GlyfsTer11
ENST00000480032.4:n.3517del
ENST00000631182.2:c.3374del	ENSP00000486885.1:p.Glu1125GlyfsTer11
NM_001040142.1:c.3374del	NP_001035232.1:p.Glu1125GlyfsTer11
NM_001040143.1:c.3374del	NP_001035233.1:p.Glu1125GlyfsTer11
NM_021007.2:c.3374del	NP_066287.2:p.Glu1125GlyfsTer11
XM_005246750.2:c.3374del	XP_005246807.1:p.Glu1125GlyfsTer11
XM_005246753.2:c.3374del	XP_005246810.1:p.Glu1125GlyfsTer11
XM_005246754.3:c.3344del	XP_005246811.1:p.Glu1115GlyfsTer11
XM_005246755.3:c.2621del	XP_005246812.1:p.Glu874GlyfsTer11
XM_011511608.1:c.3374del	XP_011509910.1:p.Glu1125GlyfsTer11
XM_011511609.1:c.3374del	XP_011509911.1:p.Glu1125GlyfsTer11
XM_005246753.3:c.3374del	XP_005246810.1:p.Glu1125GlyfsTer11
XM_017004656.1:c.3374del	XP_016860145.1:p.Glu1125GlyfsTer11
XM_017004657.1:c.3374del	XP_016860146.1:p.Glu1125GlyfsTer11
XM_017004658.1:c.2621del	XP_016860147.1:p.Glu874GlyfsTer11
XM_017004659.1:c.1172del	XP_016860148.1:p.Glu391GlyfsTer11
XM_024453037.1:c.2621del	XP_024308805.1:p.Glu874GlyfsTer11
NM_001040142.2:c.3374del MANE Select	NP_001035232.1:p.Glu1125GlyfsTer11
NM_001040143.2:c.3374del	NP_001035233.1:p.Glu1125GlyfsTer11
NM_001371246.1:c.3374del MANE Plus Clinical	NP_001358175.1:p.Glu1125GlyfsTer11
NM_001371247.1:c.3374del	NP_001358176.1:p.Glu1125GlyfsTer11
NM_021007.3:c.3374del	NP_066287.2:p.Glu1125GlyfsTer11