Canonical Allele Identifier: CA153218787

Gene: PMS2

Linked Data

• dbSNP Id: rs533727628
• gnomAD v2: 7-6012865-C-T
• gnomAD v3: 7-5973234-C-T
• gnomAD v4: 7-5973234-C-T
• MyVariant Identifiers: chr7:g.6012865C>T (hg19) ; chr7:g.5973234C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5973234C>T , CM000669.2:g.5973234C>T	GRCh38
NC_000007.13:g.6012865C>T , CM000669.1:g.6012865C>T	GRCh37
NC_000007.12:g.5979391C>T	NCBI36
NG_008466.1:g.40873G>A , LRG_161:g.40873G>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000699814.2:c.*2150G>A	ENSP00000514615.2:n.*2150G>A
ENST00000699930.2:c.*165G>A	ENSP00000514695.2:n.*165G>A
ENST00000699752.1:c.*165G>A	ENSP00000514561.1:n.*165G>A
ENST00000699753.1:c.*2175G>A	ENSP00000514562.1:n.*2175G>A
ENST00000699754.1:c.*165G>A	ENSP00000514563.1:n.*165G>A
ENST00000699755.1:c.*2153G>A	ENSP00000514564.1:n.*2153G>A
ENST00000699756.1:c.*2341G>A	ENSP00000514565.1:n.*2341G>A
ENST00000699757.1:c.*2011G>A	ENSP00000514566.1:n.*2011G>A
ENST00000699758.1:c.*2011G>A	ENSP00000514567.1:n.*2011G>A
ENST00000699759.1:n.3608G>A
ENST00000699760.1:c.*165G>A	ENSP00000514568.1:n.*165G>A
ENST00000699761.1:c.*165G>A	ENSP00000514569.1:n.*165G>A
ENST00000699762.1:c.*165G>A	ENSP00000514570.1:n.*165G>A
ENST00000699763.1:c.*1844G>A	ENSP00000514571.1:n.*1844G>A
ENST00000699764.1:c.*1072G>A	ENSP00000514572.1:n.*1072G>A
ENST00000699765.1:c.*1749G>A	ENSP00000514573.1:n.*1749G>A
ENST00000699766.1:c.*165G>A	ENSP00000514574.1:n.*165G>A
ENST00000699767.1:c.*395G>A	ENSP00000514575.1:n.*395G>A
ENST00000699768.1:c.*165G>A	ENSP00000514576.1:n.*165G>A
ENST00000699811.1:c.*165G>A	ENSP00000514614.1:n.*165G>A
ENST00000699813.1:n.2867G>A
ENST00000699814.1:c.2377G>A
ENST00000699815.1:c.*2285G>A	ENSP00000514616.1:n.*2285G>A
ENST00000699816.1:c.*1644G>A	ENSP00000514617.1:n.*1644G>A
ENST00000699817.1:c.*2348G>A	ENSP00000514618.1:n.*2348G>A
ENST00000699818.1:c.*165G>A	ENSP00000514619.1:n.*165G>A
ENST00000699819.1:c.*1911G>A	ENSP00000514620.1:n.*1911G>A
ENST00000699820.1:c.*692G>A	ENSP00000514621.1:n.*692G>A
ENST00000699821.1:c.*165G>A	ENSP00000514622.1:n.*165G>A
ENST00000699833.1:n.4526G>A
ENST00000699838.1:c.*2654G>A	ENSP00000514636.1:n.*2654G>A
ENST00000699839.1:c.*165G>A	ENSP00000514637.1:n.*165G>A
ENST00000699916.1:c.*2011G>A	ENSP00000514684.1:n.*2011G>A
ENST00000699917.1:c.*2203G>A	ENSP00000514685.1:n.*2203G>A
ENST00000699918.1:c.*2255G>A	ENSP00000514686.1:n.*2255G>A
ENST00000699919.1:c.*2341G>A	ENSP00000514687.1:n.*2341G>A
ENST00000699920.1:c.*2390G>A	ENSP00000514688.1:n.*2390G>A
ENST00000699928.1:c.*692G>A	ENSP00000514693.1:n.*692G>A
ENST00000265849.12:c.*165G>A MANE Select	ENSP00000265849.7:n.*165G>A
XM_006715742.2:c.*165G>A	XP_006715805.1:n.*165G>A
XM_006715744.2:c.*165G>A	XP_006715807.1:n.*165G>A
XM_011515427.1:c.*165G>A	XP_011513729.1:n.*165G>A
XM_011515428.1:c.*165G>A	XP_011513730.1:n.*165G>A
XM_011515429.1:c.*165G>A	XP_011513731.1:n.*165G>A
XM_011515430.1:c.*165G>A	XP_011513732.1:n.*165G>A
NM_000535.6:c.*165G>A	NP_000526.2:n.*165G>A
NM_001322003.1:c.*165G>A	NP_001308932.1:n.*165G>A
NM_001322004.1:c.*165G>A	NP_001308933.1:n.*165G>A
NM_001322005.1:c.*165G>A	NP_001308934.1:n.*165G>A
NM_001322006.1:c.*165G>A	NP_001308935.1:n.*165G>A
NM_001322007.1:c.*165G>A	NP_001308936.1:n.*165G>A
NM_001322008.1:c.*165G>A	NP_001308937.1:n.*165G>A
NM_001322009.1:c.*165G>A	NP_001308938.1:n.*165G>A
NM_001322010.1:c.*165G>A	NP_001308939.1:n.*165G>A
NM_001322011.1:c.*165G>A	NP_001308940.1:n.*165G>A
NM_001322012.1:c.*165G>A	NP_001308941.1:n.*165G>A
NM_001322013.1:c.*165G>A	NP_001308942.1:n.*165G>A
NM_001322014.1:c.*165G>A	NP_001308943.1:n.*165G>A
NM_001322015.1:c.*165G>A	NP_001308944.1:n.*165G>A
NR_136154.1:n.2798G>A
XM_006715744.4:c.*165G>A	XP_006715807.1:n.*165G>A
XM_017012342.2:c.*165G>A	XP_016867831.1:n.*165G>A
XM_024446800.1:c.*165G>A	XP_024302568.1:n.*165G>A
NM_000535.7:c.*165G>A MANE Select	NP_000526.2:n.*165G>A
NM_001322003.2:c.*165G>A	NP_001308932.1:n.*165G>A
NM_001322004.2:c.*165G>A	NP_001308933.1:n.*165G>A
NM_001322005.2:c.*165G>A	NP_001308934.1:n.*165G>A
NM_001322006.2:c.*165G>A	NP_001308935.1:n.*165G>A
NM_001322008.2:c.*165G>A	NP_001308937.1:n.*165G>A
NM_001322009.2:c.*165G>A	NP_001308938.1:n.*165G>A
NM_001322010.2:c.*165G>A	NP_001308939.1:n.*165G>A
NM_001322011.2:c.*165G>A	NP_001308940.1:n.*165G>A
NM_001322012.2:c.*165G>A	NP_001308941.1:n.*165G>A
NM_001322013.2:c.*165G>A	NP_001308942.1:n.*165G>A
NM_001322014.2:c.*165G>A	NP_001308943.1:n.*165G>A
NM_001322015.2:c.*165G>A	NP_001308944.1:n.*165G>A
NM_001322007.2:c.*165G>A	NP_001308936.1:n.*165G>A