Canonical Allele Identifier: CA1304953748

Gene: SCN9A SCN1A-AS1

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166251706A= , CM000664.2:g.166251706A=	GRCh38
NC_000002.11:g.167108216A= , CM000664.1:g.167108216A=	GRCh37
NC_000002.10:g.166816462A=	NCBI36
NG_012798.1:g.129282T= , LRG_369:g.129282T=

Transcript Alleles

HGVS	Amino-acid change
ENST00000303354.11:c.3472+59T= (SCN9A)	ENSP00000304748.7:n.3472+59T=
ENST00000409435.6:c.3472+59T= (SCN9A)	ENSP00000386330.2:n.3472+59T=
ENST00000642356.2:c.3472+59T= (SCN9A) MANE Select	ENSP00000495601.1:n.3472+59T=
ENST00000643319.1:c.554+59T= (SCN9A)	ENSP00000494071.1:n.554+59T=
ENST00000644316.1:c.3439+59T= (SCN9A)	ENSP00000493939.1:n.3439+59T=
ENST00000645907.1:c.3439+59T= (SCN9A)	ENSP00000495983.1:n.3439+59T=
ENST00000667201.2:c.2097+59T= (SCN9A)
ENST00000303354.10:c.3472+59T= (SCN9A)	ENSP00000304748.7:n.3472+59T=
ENST00000409435.5:c.3472+59T= (SCN9A)	ENSP00000386330.1:n.3472+59T=
ENST00000409672.5:c.3439+59T= (SCN9A)	ENSP00000386306.1:n.3439+59T=
NM_002977.3:c.3439+59T= , LRG_369t1:c.3439+59T= (SCN9A)	NP_002968.1:n.3439+59T=
NR_110260.1:n.736-73A= (SCN1A-AS1)
XM_005246757.1:c.3472+59T= (SCN9A)	XP_005246814.1:n.3472+59T=
XM_011511616.1:c.3472+59T= (SCN9A)	XP_011509918.1:n.3472+59T=
XM_011511617.1:c.3472+59T= (SCN9A)	XP_011509919.1:n.3472+59T=
XM_011511618.1:c.3439+59T= (SCN9A)	XP_011509920.1:n.3439+59T=
XM_011511619.1:c.3472+59T= (SCN9A)	XP_011509921.1:n.3472+59T=
NM_001365536.1:c.3472+59T= (SCN9A) MANE Select	NP_001352465.1:n.3472+59T=
XM_011511616.3:c.3472+59T= (SCN9A)	XP_011509918.1:n.3472+59T=
XM_011511617.2:c.3472+59T= (SCN9A)	XP_011509919.1:n.3472+59T=
XM_011511618.2:c.3439+59T= (SCN9A)	XP_011509920.1:n.3439+59T=
XM_011511619.2:c.3472+59T= (SCN9A)	XP_011509921.1:n.3472+59T=
XM_017004668.1:c.3085+59T= (SCN9A)	XP_016860157.1:n.3085+59T=
XM_017004669.1:c.2728+59T= (SCN9A)	XP_016860158.1:n.2728+59T=