Canonical Allele Identifier: CA1304953745

Gene: SCN9A SCN1A-AS1

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166251697T= , CM000664.2:g.166251697T=	GRCh38
NC_000002.11:g.167108207T= , CM000664.1:g.167108207T=	GRCh37
NC_000002.10:g.166816453T=	NCBI36
NG_012798.1:g.129291A= , LRG_369:g.129291A=

Transcript Alleles

HGVS	Amino-acid change
ENST00000303354.11:c.3472+68A= (SCN9A)	ENSP00000304748.7:n.3472+68A=
ENST00000409435.6:c.3472+68A= (SCN9A)	ENSP00000386330.2:n.3472+68A=
ENST00000642356.2:c.3472+68A= (SCN9A) MANE Select	ENSP00000495601.1:n.3472+68A=
ENST00000643319.1:c.554+68A= (SCN9A)	ENSP00000494071.1:n.554+68A=
ENST00000644316.1:c.3439+68A= (SCN9A)	ENSP00000493939.1:n.3439+68A=
ENST00000645907.1:c.3439+68A= (SCN9A)	ENSP00000495983.1:n.3439+68A=
ENST00000667201.2:c.2097+68A= (SCN9A)
ENST00000303354.10:c.3472+68A= (SCN9A)	ENSP00000304748.7:n.3472+68A=
ENST00000409435.5:c.3472+68A= (SCN9A)	ENSP00000386330.1:n.3472+68A=
ENST00000409672.5:c.3439+68A= (SCN9A)	ENSP00000386306.1:n.3439+68A=
NM_002977.3:c.3439+68A= , LRG_369t1:c.3439+68A= (SCN9A)	NP_002968.1:n.3439+68A=
NR_110260.1:n.736-82T= (SCN1A-AS1)
XM_005246757.1:c.3472+68A= (SCN9A)	XP_005246814.1:n.3472+68A=
XM_011511616.1:c.3472+68A= (SCN9A)	XP_011509918.1:n.3472+68A=
XM_011511617.1:c.3472+68A= (SCN9A)	XP_011509919.1:n.3472+68A=
XM_011511618.1:c.3439+68A= (SCN9A)	XP_011509920.1:n.3439+68A=
XM_011511619.1:c.3472+68A= (SCN9A)	XP_011509921.1:n.3472+68A=
NM_001365536.1:c.3472+68A= (SCN9A) MANE Select	NP_001352465.1:n.3472+68A=
XM_011511616.3:c.3472+68A= (SCN9A)	XP_011509918.1:n.3472+68A=
XM_011511617.2:c.3472+68A= (SCN9A)	XP_011509919.1:n.3472+68A=
XM_011511618.2:c.3439+68A= (SCN9A)	XP_011509920.1:n.3439+68A=
XM_011511619.2:c.3472+68A= (SCN9A)	XP_011509921.1:n.3472+68A=
XM_017004668.1:c.3085+68A= (SCN9A)	XP_016860157.1:n.3085+68A=
XM_017004669.1:c.2728+68A= (SCN9A)	XP_016860158.1:n.2728+68A=