Canonical Allele Identifier: CA1304837364
Gene: SCN1A HGNC NCBI

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.165991849T= , CM000664.2:g.165991849T= GRCh38
NC_000002.11:g.166848359T= , CM000664.1:g.166848359T= GRCh37
NC_000002.10:g.166556605T= NCBI36
NG_011906.1:g.86791A= , LRG_8:g.86791A=

Transcript Alleles

HGVS Amino-acid change
ENST00000689288.1:c.*3462A= ENSP00000509637.1:n.*3462A=
ENST00000303395.9:c.5426A= ENSP00000303540.4:p.Tyr1809=
ENST00000635750.1:c.5393A= ENSP00000490799.1:p.Tyr1798=
ENST00000635776.1:c.*2259A= ENSP00000490692.1:n.*2259A=
ENST00000636194.1:c.*2919A= ENSP00000490288.1:n.*2919A=
ENST00000637038.1:c.2288A=
ENST00000637988.1:c.5393A= ENSP00000490780.1:p.Tyr1798=
ENST00000640036.1:c.5393A= ENSP00000491573.1:p.Tyr1798=
ENST00000641575.1:c.5390A= ENSP00000492917.1:p.Tyr1797=
ENST00000641603.1:c.5144A= ENSP00000492945.1:p.Tyr1715=
ENST00000641996.1:c.*4980A= ENSP00000493054.1:n.*4980A=
ENST00000671940.1:c.*3369A= ENSP00000500336.1:n.*3369A=
ENST00000673490.1:n.7899A=
ENST00000674923.1:c.5426A= MANE Select ENSP00000501589.1:p.Tyr1809=
ENST00000303395.8:c.5426A= ENSP00000303540.4:p.Tyr1809=
ENST00000375405.7:c.5393A= ENSP00000364554.3:p.Tyr1798=
ENST00000409050.1:c.5342A= ENSP00000386312.1:p.Tyr1781=
ENST00000423058.6:c.5426A= ENSP00000407030.2:p.Tyr1809=
NM_001165963.1:c.5426A= NP_001159435.1:p.Tyr1809=
NM_001165964.1:c.5342A= NP_001159436.1:p.Tyr1781=
NM_001202435.1:c.5426A= NP_001189364.1:p.Tyr1809=
NM_006920.4:c.5393A= , LRG_8t1:c.5393A= NP_008851.3:p.Tyr1798=
NR_110598.1:n.176-23764T=
XM_011511598.1:c.5426A= XP_011509900.1:p.Tyr1809=
XM_011511599.1:c.5426A= XP_011509901.1:p.Tyr1809=
XM_011511600.1:c.5426A= XP_011509902.1:p.Tyr1809=
XM_011511601.1:c.5426A= XP_011509903.1:p.Tyr1809=
XM_011511602.1:c.5426A= XP_011509904.1:p.Tyr1809=
XM_011511603.1:c.5423A= XP_011509905.1:p.Tyr1808=
XM_011511604.1:c.5393A= XP_011509906.1:p.Tyr1798=
XM_011511605.1:c.5390A= XP_011509907.1:p.Tyr1797=
XM_011511606.1:c.5342A= XP_011509908.1:p.Tyr1781=
XM_011511607.1:c.5144A= XP_011509909.1:p.Tyr1715=
NM_001165963.2:c.5426A= NP_001159435.1:p.Tyr1809=
NM_001165964.2:c.5342A= NP_001159436.1:p.Tyr1781=
NM_001202435.2:c.5426A= NP_001189364.1:p.Tyr1809=
NM_001353948.1:c.5426A= NP_001340877.1:p.Tyr1809=
NM_001353949.1:c.5393A= NP_001340878.1:p.Tyr1798=
NM_001353950.1:c.5393A= NP_001340879.1:p.Tyr1798=
NM_001353951.1:c.5393A= NP_001340880.1:p.Tyr1798=
NM_001353952.1:c.5393A= NP_001340881.1:p.Tyr1798=
NM_001353954.1:c.5390A= NP_001340883.1:p.Tyr1797=
NM_001353955.1:c.5390A= NP_001340884.1:p.Tyr1797=
NM_001353957.1:c.5342A= NP_001340886.1:p.Tyr1781=
NM_001353958.1:c.5342A= NP_001340887.1:p.Tyr1781=
NM_001353960.1:c.5339A= NP_001340889.1:p.Tyr1780=
NM_001353961.1:c.2984A= NP_001340890.1:p.Tyr995=
NM_006920.5:c.5393A= NP_008851.3:p.Tyr1798=
NR_148667.1:n.5862A=
XR_001738883.1:n.5876A=
XR_001738884.1:n.5848A=
NM_001165963.3:c.5426A= NP_001159435.1:p.Tyr1809=
NM_001165964.3:c.5342A= NP_001159436.1:p.Tyr1781=
NM_001202435.3:c.5426A= NP_001189364.1:p.Tyr1809=
NM_001353948.2:c.5426A= NP_001340877.1:p.Tyr1809=
NM_001353949.2:c.5393A= NP_001340878.1:p.Tyr1798=
NM_001353950.2:c.5393A= NP_001340879.1:p.Tyr1798=
NM_001353951.2:c.5393A= NP_001340880.1:p.Tyr1798=
NM_001353952.2:c.5393A= NP_001340881.1:p.Tyr1798=
NM_001353954.2:c.5390A= NP_001340883.1:p.Tyr1797=
NM_001353955.2:c.5390A= NP_001340884.1:p.Tyr1797=
NM_001353957.2:c.5342A= NP_001340886.1:p.Tyr1781=
NM_001353958.2:c.5342A= NP_001340887.1:p.Tyr1781=
NM_001353960.2:c.5339A= NP_001340889.1:p.Tyr1780=
NM_001353961.2:c.2984A= NP_001340890.1:p.Tyr995=
NM_006920.6:c.5393A= NP_008851.3:p.Tyr1798=
NR_148667.2:n.5843A=
NM_001165963.4:c.5426A= MANE Select NP_001159435.1:p.Tyr1809=