Canonical Allele Identifier: CA10588430
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 265586
dbSNP Id: rs886039646
gnomAD v3: 7-5973466-CA-C
gnomAD v4: 7-5973466-CA-C

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5973467del , CM000669.2:g.5973467del GRCh38
NC_000007.13:g.6013098del , CM000669.1:g.6013098del GRCh37
NC_000007.12:g.5979624del NCBI36
NG_008466.1:g.40640del , LRG_161:g.40640del

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1917del ENSP00000514615.2:n.*1917del
ENST00000699840.2:c.2518del ENSP00000514638.2:p.Trp840GlyfsTer10
ENST00000699930.2:c.2413del ENSP00000514695.2:p.Trp805GlyfsTer10
ENST00000406569.8:c.1881del ENSP00000514464.1:n.1881del
ENST00000644110.2:c.*2115del ENSP00000496392.2:n.*2115del
ENST00000699752.1:c.2365del ENSP00000514561.1:p.Trp789GlyfsTer10
ENST00000699753.1:c.*1942del ENSP00000514562.1:n.*1942del
ENST00000699754.1:c.2323del ENSP00000514563.1:p.Trp775GlyfsTer10
ENST00000699755.1:c.*1920del ENSP00000514564.1:n.*1920del
ENST00000699756.1:c.*2108del ENSP00000514565.1:n.*2108del
ENST00000699757.1:c.*1778del ENSP00000514566.1:n.*1778del
ENST00000699758.1:c.*1778del ENSP00000514567.1:n.*1778del
ENST00000699759.1:n.3375del
ENST00000699760.1:c.2203del ENSP00000514568.1:p.Trp735GlyfsTer10
ENST00000699761.1:c.2116del ENSP00000514569.1:p.Trp706GlyfsTer10
ENST00000699762.1:c.1948del ENSP00000514570.1:p.Trp650GlyfsTer10
ENST00000699763.1:c.*1611del ENSP00000514571.1:n.*1611del
ENST00000699764.1:c.*839del ENSP00000514572.1:n.*839del
ENST00000699765.1:c.*1516del ENSP00000514573.1:n.*1516del
ENST00000699766.1:c.2554del ENSP00000514574.1:p.Trp852GlyfsTer10
ENST00000699767.1:c.*162del ENSP00000514575.1:n.*162del
ENST00000699768.1:c.2377del ENSP00000514576.1:p.Trp793GlyfsTer10
ENST00000699811.1:c.2116del ENSP00000514614.1:p.Trp706GlyfsTer10
ENST00000699813.1:n.2634del
ENST00000699814.1:c.2144del
ENST00000699815.1:c.*2052del ENSP00000514616.1:n.*2052del
ENST00000699816.1:c.*1411del ENSP00000514617.1:n.*1411del
ENST00000699817.1:c.*2115del ENSP00000514618.1:n.*2115del
ENST00000699818.1:c.2116del ENSP00000514619.1:p.Trp706GlyfsTer10
ENST00000699819.1:c.*1678del ENSP00000514620.1:n.*1678del
ENST00000699820.1:c.*459del ENSP00000514621.1:n.*459del
ENST00000699821.1:c.2149del ENSP00000514622.1:p.Trp717GlyfsTer10
ENST00000699822.1:c.*1973del ENSP00000514623.1:n.*1973del
ENST00000699823.1:c.2116del ENSP00000514624.1:p.Trp706GlyfsTer10
ENST00000699824.1:c.*2024del ENSP00000514625.1:n.*2024del
ENST00000699825.1:c.1960del ENSP00000514626.1:p.Trp654GlyfsTer10
ENST00000699826.1:c.*1920del ENSP00000514627.1:n.*1920del
ENST00000699827.1:c.2353del ENSP00000514628.1:p.Trp785GlyfsTer10
ENST00000699828.1:c.*1611del ENSP00000514629.1:n.*1611del
ENST00000699833.1:n.4293del
ENST00000699837.1:c.2116del ENSP00000514635.1:p.Trp706GlyfsTer10
ENST00000699838.1:c.*2421del ENSP00000514636.1:n.*2421del
ENST00000699839.1:c.2707del ENSP00000514637.1:p.Trp903GlyfsTer10
ENST00000699916.1:c.*1778del ENSP00000514684.1:n.*1778del
ENST00000699917.1:c.*1970del ENSP00000514685.1:n.*1970del
ENST00000699918.1:c.*2022del ENSP00000514686.1:n.*2022del
ENST00000699919.1:c.*2108del ENSP00000514687.1:n.*2108del
ENST00000699920.1:c.*2157del ENSP00000514688.1:n.*2157del
ENST00000699928.1:c.*459del ENSP00000514693.1:n.*459del
ENST00000699951.1:c.*1574del ENSP00000514706.1:n.*1574del
ENST00000699952.1:c.*75del ENSP00000514707.1:n.*75del
ENST00000265849.12:c.2521del MANE Select ENSP00000265849.7:p.Trp841GlyfsTer10
ENST00000642292.1:c.2116del ENSP00000495524.1:p.Trp706GlyfsTer10
ENST00000642456.1:c.2116del ENSP00000493814.1:p.Trp706GlyfsTer10
ENST00000643595.1:c.*1920del ENSP00000494497.1:n.*1920del
ENST00000644110.1:c.2203del ENSP00000496392.1:p.Trp735GlyfsTer10
ENST00000265849.11:c.2521del ENSP00000265849.7:p.Trp841GlyfsTer10
ENST00000382321.5:c.1318del ENSP00000371758.4:p.Trp440GlyfsTer10
ENST00000441476.6:c.2203del ENSP00000392843.2:p.Trp735GlyfsTer10
NM_000535.5:c.2521del , LRG_161t1:c.2521del NP_000526.1:p.Trp841GlyfsTer10
NR_003085.2:n.2603del
XM_006715742.2:c.2515del XP_006715805.1:p.Trp839GlyfsTer10
XM_006715744.2:c.1588del XP_006715807.1:p.Trp530GlyfsTer10
XM_011515427.1:c.2566del XP_011513729.1:p.Trp856GlyfsTer10
XM_011515428.1:c.2410del XP_011513730.1:p.Trp804GlyfsTer10
XM_011515429.1:c.2203del XP_011513731.1:p.Trp735GlyfsTer10
XM_011515430.1:c.2203del XP_011513732.1:p.Trp735GlyfsTer10
NM_000535.6:c.2521del NP_000526.2:p.Trp841GlyfsTer10
NM_001322003.1:c.2116del NP_001308932.1:p.Trp706GlyfsTer10
NM_001322004.1:c.2116del NP_001308933.1:p.Trp706GlyfsTer10
NM_001322005.1:c.2116del NP_001308934.1:p.Trp706GlyfsTer10
NM_001322006.1:c.2365del NP_001308935.1:p.Trp789GlyfsTer10
NM_001322007.1:c.2203del NP_001308936.1:p.Trp735GlyfsTer10
NM_001322008.1:c.2203del NP_001308937.1:p.Trp735GlyfsTer10
NM_001322009.1:c.2149del NP_001308938.1:p.Trp717GlyfsTer10
NM_001322010.1:c.1960del NP_001308939.1:p.Trp654GlyfsTer10
NM_001322011.1:c.1588del NP_001308940.1:p.Trp530GlyfsTer10
NM_001322012.1:c.1588del NP_001308941.1:p.Trp530GlyfsTer10
NM_001322013.1:c.1948del NP_001308942.1:p.Trp650GlyfsTer10
NM_001322014.1:c.2554del NP_001308943.1:p.Trp852GlyfsTer10
NM_001322015.1:c.2212del NP_001308944.1:p.Trp738GlyfsTer10
NR_136154.1:n.2565del
XM_006715744.4:c.1588del XP_006715807.1:p.Trp530GlyfsTer10
XM_017012342.2:c.1588del XP_016867831.1:p.Trp530GlyfsTer10
XM_024446800.1:c.1960del XP_024302568.1:p.Trp654GlyfsTer10
NM_000535.7:c.2521del MANE Select NP_000526.2:p.Trp841GlyfsTer10
NM_001322003.2:c.2116del NP_001308932.1:p.Trp706GlyfsTer10
NM_001322004.2:c.2116del NP_001308933.1:p.Trp706GlyfsTer10
NM_001322005.2:c.2116del NP_001308934.1:p.Trp706GlyfsTer10
NM_001322006.2:c.2365del NP_001308935.1:p.Trp789GlyfsTer10
NM_001322008.2:c.2203del NP_001308937.1:p.Trp735GlyfsTer10
NM_001322009.2:c.2149del NP_001308938.1:p.Trp717GlyfsTer10
NM_001322010.2:c.1960del NP_001308939.1:p.Trp654GlyfsTer10
NM_001322011.2:c.1588del NP_001308940.1:p.Trp530GlyfsTer10
NM_001322012.2:c.1588del NP_001308941.1:p.Trp530GlyfsTer10
NM_001322013.2:c.1948del NP_001308942.1:p.Trp650GlyfsTer10
NM_001322014.2:c.2554del NP_001308943.1:p.Trp852GlyfsTer10
NM_001322015.2:c.2212del NP_001308944.1:p.Trp738GlyfsTer10
NM_001322007.2:c.2203del NP_001308936.1:p.Trp735GlyfsTer10