Canonical Allele Identifier: CA10582088

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 237196
• ClinVar RCV Id: RCV001339702
• dbSNP Id: rs878853737
• MyVariant Identifiers: chr2:g.48033424C>A (hg19) ; chr2:g.47806285C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47806285C>A , CM000664.2:g.47806285C>A	GRCh38
NC_000002.11:g.48033424C>A , CM000664.1:g.48033424C>A	GRCh37
NC_000002.10:g.47886928C>A	NCBI36
NG_007111.1:g.28139C>A , LRG_219:g.28139C>A
NG_008397.1:g.104391G>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.3431C>A (MSH6)	ENSP00000406248.2:p.Thr1144Lys
ENST00000420813.6:c.3431C>A (MSH6)	ENSP00000390382.2:p.Thr1144Lys
ENST00000455383.6:c.3431C>A (MSH6)	ENSP00000397484.2:p.Thr1144Lys
ENST00000700004.2:c.3344C>A (MSH6)	ENSP00000514752.2:p.Thr1115Lys
ENST00000699999.1:n.4402C>A (MSH6)
ENST00000700000.1:c.2162C>A (MSH6)	ENSP00000514749.1:p.Thr721Lys
ENST00000700002.1:c.3734C>A (MSH6)	ENSP00000514750.1:p.Thr1245Lys
ENST00000700003.1:c.1183C>A (MSH6)	ENSP00000514751.1:n.1183C>A
ENST00000700004.1:c.2501C>A (MSH6)	ENSP00000514752.1:p.Thr834Lys
ENST00000700005.1:n.2579C>A (MSH6)
ENST00000700006.1:n.4886C>A (MSH6)
ENST00000700007.1:n.2323C>A (MSH6)
ENST00000700008.1:n.1897C>A (MSH6)
ENST00000700009.1:n.2392C>A (MSH6)
ENST00000700010.1:n.1137C>A (MSH6)
ENST00000700011.1:n.3022C>A (MSH6)
ENST00000682451.1:n.4463G>T (FBXO11)
ENST00000684712.1:n.4725G>T (FBXO11)
ENST00000234420.11:c.3728C>A (MSH6) MANE Select	ENSP00000234420.5:p.Thr1243Lys
ENST00000540021.6:c.3338C>A (MSH6)	ENSP00000446475.1:p.Thr1113Lys
ENST00000652107.1:c.3431C>A (MSH6)	ENSP00000498629.1:p.Thr1144Lys
ENST00000673637.1:c.3431C>A (MSH6)	ENSP00000501310.1:p.Thr1144Lys
ENST00000234420.9:c.3728C>A (MSH6)	ENSP00000234420.4:p.Thr1243Lys
ENST00000405808.5:c.169+1910G>T (FBXO11)	ENSP00000385127.1:n.169+1910G>T
ENST00000434234.5:c.*124+1709G>T (FBXO11)	ENSP00000402692.1:n.*124+1709G>T
ENST00000445503.5:c.*3075C>A (MSH6)	ENSP00000405294.1:n.*3075C>A
ENST00000538136.1:c.2822C>A (MSH6)	ENSP00000438580.1:p.Thr941Lys
ENST00000540021.5:c.3338C>A (MSH6)	ENSP00000446475.1:p.Thr1113Lys
ENST00000614496.4:c.2822C>A (MSH6)	ENSP00000477844.1:p.Thr941Lys
ENST00000622629.4:c.632C>A (MSH6)	ENSP00000482078.1:p.Thr211Lys
NM_000179.2:c.3728C>A , LRG_219t1:c.3728C>A (MSH6)	NP_000170.1:p.Thr1243Lys
NM_001281492.1:c.3338C>A (MSH6)	NP_001268421.1:p.Thr1113Lys
NM_001281493.1:c.2822C>A (MSH6)	NP_001268422.1:p.Thr941Lys
NM_001281494.1:c.2822C>A (MSH6)	NP_001268423.1:p.Thr941Lys
XM_005264271.1:c.3431C>A (MSH6)	XP_005264328.1:p.Thr1144Lys
XM_011532798.1:c.3545C>A (MSH6)	XP_011531100.1:p.Thr1182Lys
XM_011532799.1:c.3431C>A (MSH6)	XP_011531101.1:p.Thr1144Lys
XM_011532800.1:c.3431C>A (MSH6)	XP_011531102.1:p.Thr1144Lys
XM_024452819.1:c.3728C>A (MSH6)	XP_024308587.1:p.Thr1243Lys
XM_024452820.1:c.3545C>A (MSH6)	XP_024308588.1:p.Thr1182Lys
XM_024452821.1:c.3431C>A (MSH6)	XP_024308589.1:p.Thr1144Lys
XM_024452822.1:c.2822C>A (MSH6)	XP_024308590.1:p.Thr941Lys
NM_000179.3:c.3728C>A (MSH6) MANE Select	NP_000170.1:p.Thr1243Lys
NM_001281492.2:c.3338C>A (MSH6)	NP_001268421.1:p.Thr1113Lys
NM_001281493.2:c.2822C>A (MSH6)	NP_001268422.1:p.Thr941Lys
NM_001281494.2:c.2822C>A (MSH6)	NP_001268423.1:p.Thr941Lys