Canonical Allele Identifier: CA10578150

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 230016
• ClinVar RCV Id: RCV000219681 ; RCV000803788
• dbSNP Id: rs773185557
• gnomAD v4: 2-47805657-G-A
• MyVariant Identifiers: chr2:g.48032796G>A (hg19) ; chr2:g.47805657G>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47805657G>A , CM000664.2:g.47805657G>A	GRCh38
NC_000002.11:g.48032796G>A , CM000664.1:g.48032796G>A	GRCh37
NC_000002.10:g.47886300G>A	NCBI36
NG_007111.1:g.27511G>A , LRG_219:g.27511G>A
NG_008397.1:g.105019C>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.3299G>A (MSH6)	ENSP00000406248.2:p.Ser1100Asn
ENST00000420813.6:c.3299G>A (MSH6)	ENSP00000390382.2:p.Ser1100Asn
ENST00000455383.6:c.3299G>A (MSH6)	ENSP00000397484.2:p.Ser1100Asn
ENST00000700004.2:c.3212G>A (MSH6)	ENSP00000514752.2:p.Ser1071Asn
ENST00000699999.1:n.4270G>A (MSH6)
ENST00000700000.1:c.2030G>A (MSH6)	ENSP00000514749.1:p.Ser677Asn
ENST00000700002.1:c.3602G>A (MSH6)	ENSP00000514750.1:p.Ser1201Asn
ENST00000700003.1:c.1051G>A (MSH6)	ENSP00000514751.1:n.1051G>A
ENST00000700004.1:c.2369G>A (MSH6)	ENSP00000514752.1:p.Ser790Asn
ENST00000700005.1:n.2447G>A (MSH6)
ENST00000700006.1:n.4258G>A (MSH6)
ENST00000700007.1:n.2191G>A (MSH6)
ENST00000700008.1:n.1765G>A (MSH6)
ENST00000700009.1:n.1764G>A (MSH6)
ENST00000700010.1:n.1005G>A (MSH6)
ENST00000700011.1:n.2890G>A (MSH6)
ENST00000234420.11:c.3596G>A (MSH6) MANE Select	ENSP00000234420.5:p.Ser1199Asn
ENST00000540021.6:c.3206G>A (MSH6)	ENSP00000446475.1:p.Ser1069Asn
ENST00000652107.1:c.3299G>A (MSH6)	ENSP00000498629.1:p.Ser1100Asn
ENST00000673637.1:c.3299G>A (MSH6)	ENSP00000501310.1:p.Ser1100Asn
ENST00000234420.9:c.3596G>A (MSH6)	ENSP00000234420.4:p.Ser1199Asn
ENST00000405808.5:c.169+2538C>T (FBXO11)	ENSP00000385127.1:n.169+2538C>T
ENST00000434234.5:c.*124+2337C>T (FBXO11)	ENSP00000402692.1:n.*124+2337C>T
ENST00000445503.5:c.*2943G>A (MSH6)	ENSP00000405294.1:n.*2943G>A
ENST00000538136.1:c.2690G>A (MSH6)	ENSP00000438580.1:p.Ser897Asn
ENST00000540021.5:c.3206G>A (MSH6)	ENSP00000446475.1:p.Ser1069Asn
ENST00000614496.4:c.2690G>A (MSH6)	ENSP00000477844.1:p.Ser897Asn
ENST00000622629.4:c.500G>A (MSH6)	ENSP00000482078.1:p.Ser167Asn
NM_000179.2:c.3596G>A , LRG_219t1:c.3596G>A (MSH6)	NP_000170.1:p.Ser1199Asn
NM_001281492.1:c.3206G>A (MSH6)	NP_001268421.1:p.Ser1069Asn
NM_001281493.1:c.2690G>A (MSH6)	NP_001268422.1:p.Ser897Asn
NM_001281494.1:c.2690G>A (MSH6)	NP_001268423.1:p.Ser897Asn
XM_005264271.1:c.3299G>A (MSH6)	XP_005264328.1:p.Ser1100Asn
XM_011532798.1:c.3413G>A (MSH6)	XP_011531100.1:p.Ser1138Asn
XM_011532799.1:c.3299G>A (MSH6)	XP_011531101.1:p.Ser1100Asn
XM_011532800.1:c.3299G>A (MSH6)	XP_011531102.1:p.Ser1100Asn
XM_024452819.1:c.3596G>A (MSH6)	XP_024308587.1:p.Ser1199Asn
XM_024452820.1:c.3413G>A (MSH6)	XP_024308588.1:p.Ser1138Asn
XM_024452821.1:c.3299G>A (MSH6)	XP_024308589.1:p.Ser1100Asn
XM_024452822.1:c.2690G>A (MSH6)	XP_024308590.1:p.Ser897Asn
NM_000179.3:c.3596G>A (MSH6) MANE Select	NP_000170.1:p.Ser1199Asn
NM_001281492.2:c.3206G>A (MSH6)	NP_001268421.1:p.Ser1069Asn
NM_001281493.2:c.2690G>A (MSH6)	NP_001268422.1:p.Ser897Asn
NM_001281494.2:c.2690G>A (MSH6)	NP_001268423.1:p.Ser897Asn