Canonical Allele Identifier: CA10578043

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 231494
• ClinVar RCV Id: RCV000221015
• dbSNP Id: rs876659191
• gnomAD v3: 2-47798744-C-T
• gnomAD v4: 2-47798744-C-T
• MyVariant Identifiers: chr2:g.48025883C>T (hg19) ; chr2:g.47798744C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47798744C>T , CM000664.2:g.47798744C>T	GRCh38
NC_000002.11:g.48025883C>T , CM000664.1:g.48025883C>T	GRCh37
NC_000002.10:g.47879387C>T	NCBI36
NG_007111.1:g.20598C>T , LRG_219:g.20598C>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.464C>T (MSH6)	ENSP00000406248.2:p.Ser155Phe
ENST00000420813.6:c.464C>T (MSH6)	ENSP00000390382.2:p.Ser155Phe
ENST00000455383.6:c.464C>T (MSH6)	ENSP00000397484.2:p.Ser155Phe
ENST00000700004.2:c.761C>T (MSH6)	ENSP00000514752.2:p.Ser254Phe
ENST00000699999.1:n.845C>T (MSH6)
ENST00000700000.1:c.761C>T (MSH6)	ENSP00000514749.1:p.Ser254Phe
ENST00000700002.1:c.767C>T (MSH6)	ENSP00000514750.1:p.Ser256Phe
ENST00000700003.1:c.627+2681C>T (MSH6)	ENSP00000514751.1:n.627+2681C>T
ENST00000234420.11:c.761C>T (MSH6) MANE Select	ENSP00000234420.5:p.Ser254Phe
ENST00000540021.6:c.371C>T (MSH6)	ENSP00000446475.1:p.Ser124Phe
ENST00000652107.1:c.464C>T (MSH6)	ENSP00000498629.1:p.Ser155Phe
ENST00000673637.1:c.464C>T (MSH6)	ENSP00000501310.1:p.Ser155Phe
ENST00000673922.1:n.483C>T (MSH6)
ENST00000234420.9:c.761C>T (MSH6)	ENSP00000234420.4:p.Ser254Phe
ENST00000405808.5:c.170-9304G>A (FBXO11)	ENSP00000385127.1:n.170-9304G>A
ENST00000434234.5:c.*124+9250G>A (FBXO11)	ENSP00000402692.1:n.*124+9250G>A
ENST00000445503.5:c.*108C>T (MSH6)	ENSP00000405294.1:n.*108C>T
ENST00000456246.1:c.*249C>T (MSH6)	ENSP00000410570.1:n.*249C>T
ENST00000538136.1:c.-146C>T (MSH6)	ENSP00000438580.1:n.-146C>T
ENST00000540021.5:c.371C>T (MSH6)	ENSP00000446475.1:p.Ser124Phe
ENST00000614496.4:c.-146C>T (MSH6)	ENSP00000477844.1:n.-146C>T
ENST00000616033.4:c.758C>T (MSH6)	ENSP00000480261.1:p.Ser253Phe
ENST00000622629.4:c.-2336C>T (MSH6)	ENSP00000482078.1:n.-2336C>T
NM_000179.2:c.761C>T , LRG_219t1:c.761C>T (MSH6)	NP_000170.1:p.Ser254Phe
NM_001281492.1:c.371C>T (MSH6)	NP_001268421.1:p.Ser124Phe
NM_001281493.1:c.-146C>T (MSH6)	NP_001268422.1:n.-146C>T
NM_001281494.1:c.-146C>T (MSH6)	NP_001268423.1:n.-146C>T
XM_005264271.1:c.464C>T (MSH6)	XP_005264328.1:p.Ser155Phe
XM_011532798.1:c.578C>T (MSH6)	XP_011531100.1:p.Ser193Phe
XM_011532799.1:c.464C>T (MSH6)	XP_011531101.1:p.Ser155Phe
XM_011532800.1:c.464C>T (MSH6)	XP_011531102.1:p.Ser155Phe
XM_024452819.1:c.761C>T (MSH6)	XP_024308587.1:p.Ser254Phe
XM_024452820.1:c.578C>T (MSH6)	XP_024308588.1:p.Ser193Phe
XM_024452821.1:c.464C>T (MSH6)	XP_024308589.1:p.Ser155Phe
XM_024452822.1:c.-146C>T (MSH6)	XP_024308590.1:n.-146C>T
NM_000179.3:c.761C>T (MSH6) MANE Select	NP_000170.1:p.Ser254Phe
NM_001281492.2:c.371C>T (MSH6)	NP_001268421.1:p.Ser124Phe
NM_001281493.2:c.-146C>T (MSH6)	NP_001268422.1:n.-146C>T
NM_001281494.2:c.-146C>T (MSH6)	NP_001268423.1:n.-146C>T