Canonical Allele Identifier: CA10163165
Gene: HPS4 HGNC NCBI

Linked Data

ClinVar Variation Id: 2879313
ClinVar RCV Id: RCV003710643
dbSNP Id: rs201385335

Genomic Alleles

HGVS Genome Assembly
NC_000022.11:g.26457924G>C , CM000684.2:g.26457924G>C GRCh38
NC_000022.10:g.26853890G>C , CM000684.1:g.26853890G>C GRCh37
NC_000022.9:g.25183890G>C NCBI36
NG_009763.2:g.30940C>G , LRG_590:g.30940C>G

Transcript Alleles

HGVS Amino-acid change
ENST00000422379.3:c.1944C>G ENSP00000415081.3:p.Leu648=
ENST00000473782.2:c.1890C>G ENSP00000514223.1:p.Leu630=
ENST00000483631.2:c.1095C>G ENSP00000514228.1:p.Leu365=
ENST00000491142.2:c.1890C>G ENSP00000514221.1:p.Leu630=
ENST00000699226.1:n.4816C>G
ENST00000699227.1:c.*1234C>G ENSP00000514220.1:n.*1234C>G
ENST00000699228.1:n.2440C>G
ENST00000699229.1:n.1307C>G
ENST00000699230.1:n.2613C>G
ENST00000699231.1:n.4902C>G
ENST00000699232.1:n.3246C>G
ENST00000699233.1:n.1761C>G
ENST00000699234.1:c.*1234C>G ENSP00000514222.1:n.*1234C>G
ENST00000699235.1:c.1095C>G ENSP00000514224.1:p.Leu365=
ENST00000699236.1:c.*1079C>G ENSP00000514225.1:n.*1079C>G
ENST00000699237.1:c.*1079C>G ENSP00000514226.1:n.*1079C>G
ENST00000699238.1:c.*1433C>G ENSP00000514227.1:n.*1433C>G
ENST00000699239.1:n.4644C>G
ENST00000699240.1:c.*1547C>G ENSP00000514229.1:n.*1547C>G
ENST00000699241.1:c.*2082C>G ENSP00000514230.1:n.*2082C>G
ENST00000699242.1:c.1800C>G ENSP00000514231.1:p.Leu600=
ENST00000699243.1:c.*1234C>G ENSP00000514232.1:n.*1234C>G
ENST00000699244.1:c.1743C>G ENSP00000514233.1:p.Leu581=
ENST00000699245.1:n.1182C>G
ENST00000699246.1:c.*1261C>G ENSP00000514234.1:n.*1261C>G
ENST00000699247.1:c.846C>G ENSP00000514235.1:p.Leu282=
ENST00000699248.1:n.3784-4520C>G
ENST00000699249.1:c.*1058-4520C>G ENSP00000514236.1:n.*1058-4520C>G
ENST00000699250.1:c.1714-4520C>G ENSP00000514237.1:n.1714-4520C>G
ENST00000699251.1:c.1890C>G ENSP00000514238.1:p.Leu630=
ENST00000699252.1:n.2440C>G
ENST00000398145.7:c.1890C>G MANE Select ENSP00000381213.2:p.Leu630=
ENST00000336873.9:c.1890C>G ENSP00000338457.5:p.Leu630=
ENST00000398145.6:c.1890C>G ENSP00000381213.2:p.Leu630=
ENST00000402105.7:c.1875C>G ENSP00000384185.3:p.Leu625=
ENST00000429411.5:c.*1462C>G ENSP00000399705.1:n.*1462C>G
ENST00000439453.5:c.*1408C>G ENSP00000406764.1:n.*1408C>G
ENST00000464362.5:c.*2221C>G ENSP00000430291.1:n.*2221C>G
ENST00000466781.5:n.4749C>G
ENST00000485842.5:n.581C>G
ENST00000493455.6:n.453C>G
ENST00000496385.5:n.2480-4520C>G
ENST00000519774.5:n.276C>G
NM_022081.5:c.1890C>G , LRG_590t1:c.1890C>G NP_071364.4:p.Leu630=
NM_152841.2:c.1875C>G , LRG_590t2:c.1875C>G NP_690054.1:p.Leu625=
NR_073135.1:n.2576C>G
NR_073136.1:n.2338C>G
XM_006724353.2:c.1944C>G XP_006724416.1:p.Leu648=
XM_006724354.2:c.1944C>G XP_006724417.1:p.Leu648=
XM_006724360.2:c.1377C>G XP_006724423.1:p.Leu459=
XM_011530485.1:c.2022C>G XP_011528787.1:p.Leu674=
XM_011530486.1:c.2022C>G XP_011528788.1:p.Leu674=
XM_011530487.1:c.2022C>G XP_011528789.1:p.Leu674=
XM_011530488.1:c.2022C>G XP_011528790.1:p.Leu674=
XM_011530489.1:c.2022C>G XP_011528791.1:p.Leu674=
XM_011530490.1:c.1968C>G XP_011528792.1:p.Leu656=
XM_011530491.1:c.2022C>G XP_011528793.1:p.Leu674=
XM_011530492.1:c.2022C>G XP_011528794.1:p.Leu674=
XM_011530493.1:c.1846-4520C>G XP_011528795.1:n.1846-4520C>G
XM_011530494.1:c.1230C>G XP_011528796.1:p.Leu410=
XM_011530495.1:c.1377C>G XP_011528797.1:p.Leu459=
XM_011530496.1:c.1230C>G XP_011528798.1:p.Leu410=
XR_937947.1:n.2681C>G
NM_001349896.1:c.1890C>G NP_001336825.1:p.Leu630=
NM_001349898.1:c.1890C>G NP_001336827.1:p.Leu630=
NM_001349899.1:c.1890C>G NP_001336828.1:p.Leu630=
NM_001349900.1:c.1944C>G NP_001336829.1:p.Leu648=
NM_001349901.1:c.1944C>G NP_001336830.1:p.Leu648=
NM_001349902.1:c.1714-4520C>G NP_001336831.1:n.1714-4520C>G
NM_001349903.1:c.1714-4520C>G NP_001336832.1:n.1714-4520C>G
NM_001349904.1:c.1890C>G NP_001336833.1:p.Leu630=
NM_001349905.1:c.1890C>G NP_001336834.1:p.Leu630=
NR_146311.1:n.2667C>G
NR_146312.1:n.2492C>G
NR_146313.1:n.2512C>G
NR_146314.1:n.2643C>G
NR_146315.1:n.2583C>G
NR_146316.1:n.2558C>G
XM_006724360.3:c.1377C>G XP_006724423.1:p.Leu459=
XM_011530485.2:c.2022C>G XP_011528787.1:p.Leu674=
XM_011530486.2:c.2022C>G XP_011528788.1:p.Leu674=
XM_011530487.2:c.2022C>G XP_011528789.1:p.Leu674=
XM_011530488.2:c.2022C>G XP_011528790.1:p.Leu674=
XM_011530489.2:c.2022C>G XP_011528791.1:p.Leu674=
XM_011530490.3:c.1968C>G XP_011528792.1:p.Leu656=
XM_011530491.3:c.2022C>G XP_011528793.1:p.Leu674=
XM_011530492.2:c.2022C>G XP_011528794.1:p.Leu674=
XM_011530493.3:c.1846-4520C>G XP_011528795.1:n.1846-4520C>G
XM_011530494.2:c.1230C>G XP_011528796.1:p.Leu410=
XM_011530495.2:c.1377C>G XP_011528797.1:p.Leu459=
XM_011530496.2:c.1230C>G XP_011528798.1:p.Leu410=
XM_017029045.2:c.1968C>G XP_016884534.1:p.Leu656=
XM_017029046.2:c.1890C>G XP_016884535.1:p.Leu630=
XM_017029047.2:c.1792-4520C>G XP_016884536.1:n.1792-4520C>G
XM_017029052.2:c.1482C>G XP_016884541.1:p.Leu494=
XM_017029053.1:c.1467C>G XP_016884542.1:p.Leu489=
XM_017029056.2:c.1095C>G XP_016884545.1:p.Leu365=
XM_017029061.2:c.1095C>G XP_016884550.1:p.Leu365=
XM_017029062.2:c.1095C>G XP_016884551.1:p.Leu365=
XM_017029063.2:c.1095C>G XP_016884552.1:p.Leu365=
XM_017029064.2:c.1095C>G XP_016884553.1:p.Leu365=
XM_024452298.1:c.1263C>G XP_024308066.1:p.Leu421=
XM_024452299.1:c.1095C>G XP_024308067.1:p.Leu365=
XM_024452300.1:c.1095C>G XP_024308068.1:p.Leu365=
XR_001755361.2:n.2598C>G
XR_001755364.1:n.2278-4520C>G
XR_001755366.2:n.3127C>G
XR_002958721.1:n.2500-4520C>G
XR_937947.2:n.2676C>G
NM_001349898.2:c.1890C>G NP_001336827.1:p.Leu630=
NM_001349899.2:c.1890C>G NP_001336828.1:p.Leu630=
NM_001349900.2:c.1944C>G NP_001336829.1:p.Leu648=
NM_001349903.2:c.1714-4520C>G NP_001336832.1:n.1714-4520C>G
NM_001349904.2:c.1890C>G NP_001336833.1:p.Leu630=
NR_073136.2:n.2145C>G
NR_146311.2:n.2587C>G
NR_146313.2:n.2432C>G
NR_146315.2:n.2503C>G
NM_022081.6:c.1890C>G MANE Select NP_071364.4:p.Leu630=
NR_146316.2:n.2478C>G