Canonical Allele Identifier: CA1005947050

Gene: PTPN22 AP4B1-AS1

Linked Data

• dbSNP Id: rs1599971
• gnomAD v3: 1-113834471-A-T
• gnomAD v4: 1-113834471-A-T

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.113834471A>T , CM000663.2:g.113834471A>T	GRCh38
NC_000001.10:g.114377093A>T , CM000663.1:g.114377093A>T	GRCh37
NC_000001.9:g.114178616A>T	NCBI36
NG_011432.1:g.42283T>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000359785.10:c.1895-32T>A (PTPN22) MANE Select	ENSP00000352833.5:n.1895-32T>A
ENST00000359785.9:c.1895-32T>A (PTPN22)	ENSP00000352833.5:n.1895-32T>A
ENST00000420377.6:c.1895-32T>A (PTPN22)	ENSP00000388229.2:n.1895-32T>A
ENST00000460620.5:c.469-14817T>A (PTPN22)	ENSP00000433141.1:n.469-14817T>A
ENST00000484147.5:n.1936-32T>A (PTPN22)
ENST00000525799.1:c.1514-32T>A (PTPN22)	ENSP00000432674.1:n.1514-32T>A
ENST00000528414.5:c.1730-32T>A (PTPN22)	ENSP00000435176.1:n.1730-32T>A
ENST00000532224.5:c.*1173-32T>A (PTPN22)	ENSP00000431249.1:n.*1173-32T>A
ENST00000538253.5:c.1823-32T>A (PTPN22)	ENSP00000439372.2:n.1823-32T>A
NM_001193431.1:c.1895-32T>A (PTPN22)	NP_001180360.1:n.1895-32T>A
NM_001193431.2:c.1895-32T>A (PTPN22)	NP_001180360.1:n.1895-32T>A
NM_001308297.1:c.1823-32T>A (PTPN22)	NP_001295226.1:n.1823-32T>A
NM_012411.4:c.1730-32T>A (PTPN22)	NP_036543.4:n.1730-32T>A
NM_012411.5:c.1730-32T>A (PTPN22)	NP_036543.4:n.1730-32T>A
NM_015967.5:c.1895-32T>A (PTPN22)	NP_057051.3:n.1895-32T>A
NM_015967.6:c.1895-32T>A (PTPN22)	NP_057051.3:n.1895-32T>A
NR_125965.1:n.414+18999A>T (AP4B1-AS1)
XM_011541221.1:c.1817-32T>A (PTPN22)	XP_011539523.1:n.1817-32T>A
XM_011541222.1:c.1895-32T>A (PTPN22)	XP_011539524.1:n.1895-32T>A
XM_011541223.1:c.1895-32T>A (PTPN22)	XP_011539525.1:n.1895-32T>A
XM_011541224.1:c.1451-32T>A (PTPN22)	XP_011539526.1:n.1451-32T>A
XM_011541225.1:c.1823-32T>A (PTPN22)	XP_011539527.1:n.1823-32T>A
XM_011541223.2:c.1895-32T>A (PTPN22)	XP_011539525.1:n.1895-32T>A
XM_011541225.2:c.1823-32T>A (PTPN22)	XP_011539527.1:n.1823-32T>A
XM_017001004.1:c.1895-32T>A (PTPN22)	XP_016856493.1:n.1895-32T>A
XM_017001005.2:c.1550-32T>A (PTPN22)	XP_016856494.1:n.1550-32T>A
NM_015967.7:c.1895-32T>A (PTPN22)	NP_057051.3:n.1895-32T>A
NM_015967.8:c.1895-32T>A (PTPN22) MANE Select	NP_057051.4:n.1895-32T>A