Canonical Allele Identifier: CA065172
Gene: SCN5A HGNC NCBI

Linked Data

ClinVar Variation Id: 928274
dbSNP Id: rs41311117
gnomAD v2: 3-38591853-A-T
gnomAD v3: 3-38550362-A-T
gnomAD v4: 3-38550362-A-T

Genomic Alleles

HGVS Genome Assembly
NC_000003.12:g.38550362A>T , CM000665.2:g.38550362A>T GRCh38
NC_000003.11:g.38591853A>T , CM000665.1:g.38591853A>T GRCh37
NC_000003.10:g.38566857A>T NCBI36
NG_008934.1:g.104311T>A , LRG_289:g.104311T>A

Transcript Alleles

HGVS Amino-acid change
ENST00000327956.7:c.6007T>A ENSP00000333674.7:p.Phe2003Ile
ENST00000333535.9:c.6010T>A ENSP00000328968.4:p.Phe2004Ile
ENST00000413689.6:c.6010T>A MANE Plus Clinical ENSP00000410257.1:p.Phe2004Ile
ENST00000423572.7:c.6007T>A MANE Select ENSP00000398266.2:p.Phe2003Ile
ENST00000333535.8:c.6010T>A ENSP00000328968.4:p.Phe2004Ile
ENST00000413689.5:c.6010T>A ENSP00000410257.1:p.Phe2004Ile
ENST00000414099.6:c.5956T>A ENSP00000398962.2:p.Phe1986Ile
ENST00000423572.6:c.6007T>A ENSP00000398266.2:p.Phe2003Ile
ENST00000425664.5:c.5956T>A ENSP00000416634.1:p.Phe1986Ile
ENST00000449557.6:c.5848T>A ENSP00000413996.2:p.Phe1950Ile
ENST00000450102.6:c.5848T>A ENSP00000403355.2:p.Phe1950Ile
ENST00000451551.6:c.5848T>A ENSP00000388797.2:p.Phe1950Ile
ENST00000455624.6:c.5911T>A ENSP00000399524.2:p.Phe1971Ile
NM_000335.4:c.6007T>A , LRG_289t2:c.6007T>A NP_000326.2:p.Phe2003Ile
NM_001099404.1:c.6010T>A , LRG_289t3:c.6010T>A NP_001092874.1:p.Phe2004Ile
NM_001099405.1:c.5956T>A NP_001092875.1:p.Phe1986Ile
NM_001160160.1:c.5911T>A NP_001153632.1:p.Phe1971Ile
NM_001160161.1:c.5848T>A NP_001153633.1:p.Phe1950Ile
NM_198056.2:c.6010T>A , LRG_289t1:c.6010T>A NP_932173.1:p.Phe2004Ile
XM_006713282.2:c.6010T>A XP_006713345.1:p.Phe2004Ile
XM_011533991.1:c.6007T>A XP_011532293.1:p.Phe2003Ile
XM_011533992.1:c.5881T>A XP_011532294.1:p.Phe1961Ile
NM_001354701.1:c.5953T>A NP_001341630.1:p.Phe1985Ile
XM_011533991.2:c.6007T>A XP_011532293.1:p.Phe2003Ile
XM_017007017.1:c.5848T>A XP_016862506.1:p.Phe1950Ile
NM_000335.5:c.6007T>A MANE Select NP_000326.2:p.Phe2003Ile
NM_001160160.2:c.5911T>A NP_001153632.1:p.Phe1971Ile
NM_001354701.2:c.5953T>A NP_001341630.1:p.Phe1985Ile
NM_001099404.2:c.6010T>A MANE Plus Clinical NP_001092874.1:p.Phe2004Ile
NM_001099405.2:c.5956T>A NP_001092875.1:p.Phe1986Ile
NM_001160161.2:c.5848T>A NP_001153633.1:p.Phe1950Ile
NM_198056.3:c.6010T>A NP_932173.1:p.Phe2004Ile