Canonical Allele Identifier: CA046679
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 569051
dbSNP Id: rs781078805
gnomAD v2: 7-6022505-GT-G
gnomAD v4: 7-5982874-GT-G

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5982876del , CM000669.2:g.5982876del GRCh38
NC_000007.13:g.6022507del , CM000669.1:g.6022507del GRCh37
NC_000007.12:g.5989033del NCBI36
NG_008466.1:g.31232del , LRG_161:g.31232del

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1519del ENSP00000514615.2:n.*1519del
ENST00000699840.2:c.2120del ENSP00000514638.2:p.Asn707ThrfsTer17
ENST00000699930.2:c.2015del ENSP00000514695.2:p.Asn672ThrfsTer17
ENST00000406569.8:c.1678+4212del ENSP00000514464.1:n.1678+4212del
ENST00000644110.2:c.*1717del ENSP00000496392.2:n.*1717del
ENST00000699752.1:c.1967del ENSP00000514561.1:p.Asn656ThrfsTer17
ENST00000699753.1:c.*1544del ENSP00000514562.1:n.*1544del
ENST00000699754.1:c.1925del ENSP00000514563.1:p.Asn642ThrfsTer17
ENST00000699755.1:c.*1522del ENSP00000514564.1:n.*1522del
ENST00000699756.1:c.*1710del ENSP00000514565.1:n.*1710del
ENST00000699757.1:c.*1380del ENSP00000514566.1:n.*1380del
ENST00000699758.1:c.*1380del ENSP00000514567.1:n.*1380del
ENST00000699759.1:n.2977del
ENST00000699760.1:c.1805del ENSP00000514568.1:p.Asn602ThrfsTer17
ENST00000699761.1:c.1718del ENSP00000514569.1:p.Asn573ThrfsTer17
ENST00000699762.1:c.1550del ENSP00000514570.1:p.Asn517ThrfsTer17
ENST00000699763.1:c.*1213del ENSP00000514571.1:n.*1213del
ENST00000699764.1:c.*441del ENSP00000514572.1:n.*441del
ENST00000699765.1:c.*1219del ENSP00000514573.1:n.*1219del
ENST00000699766.1:c.2123del ENSP00000514574.1:p.Asn708ThrfsTer17
ENST00000699767.1:c.2123del ENSP00000514575.1:p.Asn708ThrfsTer17
ENST00000699768.1:c.2123del ENSP00000514576.1:p.Asn708ThrfsTer17
ENST00000699811.1:c.1718del ENSP00000514614.1:p.Asn573ThrfsTer17
ENST00000699813.1:n.2236del
ENST00000699814.1:c.1746del
ENST00000699815.1:c.*1654del ENSP00000514616.1:n.*1654del
ENST00000699816.1:c.*1013del ENSP00000514617.1:n.*1013del
ENST00000699817.1:c.*1717del ENSP00000514618.1:n.*1717del
ENST00000699818.1:c.1718del ENSP00000514619.1:p.Asn573ThrfsTer17
ENST00000699819.1:c.*1280del ENSP00000514620.1:n.*1280del
ENST00000699820.1:c.*61del ENSP00000514621.1:n.*61del
ENST00000699821.1:c.1718del ENSP00000514622.1:p.Asn573ThrfsTer17
ENST00000699822.1:c.*1575del ENSP00000514623.1:n.*1575del
ENST00000699823.1:c.1718del ENSP00000514624.1:p.Asn573ThrfsTer17
ENST00000699824.1:c.*1626del ENSP00000514625.1:n.*1626del
ENST00000699825.1:c.1562del ENSP00000514626.1:p.Asn521ThrfsTer17
ENST00000699826.1:c.*1522del ENSP00000514627.1:n.*1522del
ENST00000699827.1:c.1955del ENSP00000514628.1:p.Asn652ThrfsTer17
ENST00000699828.1:c.*1213del ENSP00000514629.1:n.*1213del
ENST00000699833.1:n.3895del
ENST00000699837.1:c.1718del ENSP00000514635.1:p.Asn573ThrfsTer17
ENST00000699838.1:c.*2023del ENSP00000514636.1:n.*2023del
ENST00000699839.1:c.2309del ENSP00000514637.1:p.Asn770ThrfsTer17
ENST00000699916.1:c.*1380del ENSP00000514684.1:n.*1380del
ENST00000699917.1:c.*1572del ENSP00000514685.1:n.*1572del
ENST00000699918.1:c.*1624del ENSP00000514686.1:n.*1624del
ENST00000699919.1:c.*1710del ENSP00000514687.1:n.*1710del
ENST00000699920.1:c.*1759del ENSP00000514688.1:n.*1759del
ENST00000699928.1:c.*61del ENSP00000514693.1:n.*61del
ENST00000699951.1:c.*1219del ENSP00000514706.1:n.*1219del
ENST00000699952.1:c.804-9333del ENSP00000514707.1:n.804-9333del
ENST00000265849.12:c.2123del MANE Select ENSP00000265849.7:p.Asn708ThrfsTer17
ENST00000642292.1:c.1718del ENSP00000495524.1:p.Asn573ThrfsTer17
ENST00000642456.1:c.1718del ENSP00000493814.1:p.Asn573ThrfsTer17
ENST00000643595.1:c.*1522del ENSP00000494497.1:n.*1522del
ENST00000644110.1:c.1805del ENSP00000496392.1:p.Asn602ThrfsTer17
ENST00000265849.11:c.2123del ENSP00000265849.7:p.Asn708ThrfsTer17
ENST00000382321.5:c.920del ENSP00000371758.4:p.Asn307ThrfsTer17
ENST00000406569.7:n.1678+4212del
ENST00000441476.6:c.1805del ENSP00000392843.2:p.Asn602ThrfsTer17
ENST00000469652.1:n.93del
NM_000535.5:c.2123del , LRG_161t1:c.2123del NP_000526.1:p.Asn708ThrfsTer17
NR_003085.2:n.2205del
XM_006715742.2:c.2117del XP_006715805.1:p.Asn706ThrfsTer17
XM_006715744.2:c.1190del XP_006715807.1:p.Asn397ThrfsTer17
XM_011515427.1:c.2168del XP_011513729.1:p.Asn723ThrfsTer17
XM_011515428.1:c.2012del XP_011513730.1:p.Asn671ThrfsTer17
XM_011515429.1:c.1805del XP_011513731.1:p.Asn602ThrfsTer17
XM_011515430.1:c.1805del XP_011513732.1:p.Asn602ThrfsTer17
NM_000535.6:c.2123del NP_000526.2:p.Asn708ThrfsTer17
NM_001322003.1:c.1718del NP_001308932.1:p.Asn573ThrfsTer17
NM_001322004.1:c.1718del NP_001308933.1:p.Asn573ThrfsTer17
NM_001322005.1:c.1718del NP_001308934.1:p.Asn573ThrfsTer17
NM_001322006.1:c.1967del NP_001308935.1:p.Asn656ThrfsTer17
NM_001322007.1:c.1805del NP_001308936.1:p.Asn602ThrfsTer17
NM_001322008.1:c.1805del NP_001308937.1:p.Asn602ThrfsTer17
NM_001322009.1:c.1718del NP_001308938.1:p.Asn573ThrfsTer17
NM_001322010.1:c.1562del NP_001308939.1:p.Asn521ThrfsTer17
NM_001322011.1:c.1190del NP_001308940.1:p.Asn397ThrfsTer17
NM_001322012.1:c.1190del NP_001308941.1:p.Asn397ThrfsTer17
NM_001322013.1:c.1550del NP_001308942.1:p.Asn517ThrfsTer17
NM_001322014.1:c.2123del NP_001308943.1:p.Asn708ThrfsTer17
NM_001322015.1:c.1814del NP_001308944.1:p.Asn605ThrfsTer17
NR_136154.1:n.2210del
XM_006715744.4:c.1190del XP_006715807.1:p.Asn397ThrfsTer17
XM_017012342.2:c.1190del XP_016867831.1:p.Asn397ThrfsTer17
XM_024446800.1:c.1562del XP_024302568.1:p.Asn521ThrfsTer17
NM_000535.7:c.2123del MANE Select NP_000526.2:p.Asn708ThrfsTer17
NM_001322003.2:c.1718del NP_001308932.1:p.Asn573ThrfsTer17
NM_001322004.2:c.1718del NP_001308933.1:p.Asn573ThrfsTer17
NM_001322005.2:c.1718del NP_001308934.1:p.Asn573ThrfsTer17
NM_001322006.2:c.1967del NP_001308935.1:p.Asn656ThrfsTer17
NM_001322008.2:c.1805del NP_001308937.1:p.Asn602ThrfsTer17
NM_001322009.2:c.1718del NP_001308938.1:p.Asn573ThrfsTer17
NM_001322010.2:c.1562del NP_001308939.1:p.Asn521ThrfsTer17
NM_001322011.2:c.1190del NP_001308940.1:p.Asn397ThrfsTer17
NM_001322012.2:c.1190del NP_001308941.1:p.Asn397ThrfsTer17
NM_001322013.2:c.1550del NP_001308942.1:p.Asn517ThrfsTer17
NM_001322014.2:c.2123del NP_001308943.1:p.Asn708ThrfsTer17
NM_001322015.2:c.1814del NP_001308944.1:p.Asn605ThrfsTer17
NM_001322007.2:c.1805del NP_001308936.1:p.Asn602ThrfsTer17