Canonical Allele Identifier: CA044110
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 492257
dbSNP Id: rs777920014
gnomAD v2: 7-6026888-G-T
gnomAD v3: 7-5987257-G-T
gnomAD v4: 7-5987257-G-T

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987257G>T , CM000669.2:g.5987257G>T GRCh38
NC_000007.13:g.6026888G>T , CM000669.1:g.6026888G>T GRCh37
NC_000007.12:g.5993414G>T NCBI36
NG_008466.1:g.26850C>A , LRG_161:g.26850C>A

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*904C>A ENSP00000514615.2:n.*904C>A
ENST00000699840.2:c.1505C>A ENSP00000514638.2:p.Ser502Tyr
ENST00000699930.2:c.1400C>A ENSP00000514695.2:p.Ser467Tyr
ENST00000406569.8:c.1508C>A ENSP00000514464.1:p.Ser503Tyr
ENST00000644110.2:c.*1102C>A ENSP00000496392.2:n.*1102C>A
ENST00000699752.1:c.1352C>A ENSP00000514561.1:p.Ser451Tyr
ENST00000699753.1:c.*929C>A ENSP00000514562.1:n.*929C>A
ENST00000699754.1:c.1310C>A ENSP00000514563.1:p.Ser437Tyr
ENST00000699755.1:c.*907C>A ENSP00000514564.1:n.*907C>A
ENST00000699756.1:c.*1095C>A ENSP00000514565.1:n.*1095C>A
ENST00000699757.1:c.*765C>A ENSP00000514566.1:n.*765C>A
ENST00000699758.1:c.*765C>A ENSP00000514567.1:n.*765C>A
ENST00000699759.1:n.2362C>A
ENST00000699760.1:c.1190C>A ENSP00000514568.1:p.Ser397Tyr
ENST00000699761.1:c.1103C>A ENSP00000514569.1:p.Ser368Tyr
ENST00000699762.1:c.935C>A ENSP00000514570.1:p.Ser312Tyr
ENST00000699763.1:c.*598C>A ENSP00000514571.1:n.*598C>A
ENST00000699764.1:c.1508C>A ENSP00000514572.1:p.Ser503Tyr
ENST00000699765.1:c.*604C>A ENSP00000514573.1:n.*604C>A
ENST00000699766.1:c.1508C>A ENSP00000514574.1:p.Ser503Tyr
ENST00000699767.1:c.1508C>A ENSP00000514575.1:p.Ser503Tyr
ENST00000699768.1:c.1508C>A ENSP00000514576.1:p.Ser503Tyr
ENST00000699811.1:c.1103C>A ENSP00000514614.1:p.Ser368Tyr
ENST00000699813.1:n.1621C>A
ENST00000699814.1:c.1131C>A
ENST00000699815.1:c.*1039C>A ENSP00000514616.1:n.*1039C>A
ENST00000699816.1:c.*398C>A ENSP00000514617.1:n.*398C>A
ENST00000699817.1:c.*1102C>A ENSP00000514618.1:n.*1102C>A
ENST00000699818.1:c.1103C>A ENSP00000514619.1:p.Ser368Tyr
ENST00000699819.1:c.*665C>A ENSP00000514620.1:n.*665C>A
ENST00000699820.1:c.1144+2543C>A ENSP00000514621.1:n.1144+2543C>A
ENST00000699821.1:c.1103C>A ENSP00000514622.1:p.Ser368Tyr
ENST00000699822.1:c.*960C>A ENSP00000514623.1:n.*960C>A
ENST00000699823.1:c.1103C>A ENSP00000514624.1:p.Ser368Tyr
ENST00000699824.1:c.*1011C>A ENSP00000514625.1:n.*1011C>A
ENST00000699825.1:c.947C>A ENSP00000514626.1:p.Ser316Tyr
ENST00000699826.1:c.*907C>A ENSP00000514627.1:n.*907C>A
ENST00000699827.1:c.1340C>A ENSP00000514628.1:p.Ser447Tyr
ENST00000699828.1:c.*598C>A ENSP00000514629.1:n.*598C>A
ENST00000699833.1:n.3280C>A
ENST00000699837.1:c.1103C>A ENSP00000514635.1:p.Ser368Tyr
ENST00000699838.1:c.*1408C>A ENSP00000514636.1:n.*1408C>A
ENST00000699839.1:c.1694C>A ENSP00000514637.1:p.Ser565Tyr
ENST00000699916.1:c.*765C>A ENSP00000514684.1:n.*765C>A
ENST00000699917.1:c.*957C>A ENSP00000514685.1:n.*957C>A
ENST00000699918.1:c.*1009C>A ENSP00000514686.1:n.*1009C>A
ENST00000699919.1:c.*1095C>A ENSP00000514687.1:n.*1095C>A
ENST00000699920.1:c.*1144C>A ENSP00000514688.1:n.*1144C>A
ENST00000699928.1:c.989-4266C>A ENSP00000514693.1:n.989-4266C>A
ENST00000699929.1:c.*809C>A ENSP00000514694.1:n.*809C>A
ENST00000699930.1:c.1400C>A ENSP00000514695.1:p.Ser467Tyr
ENST00000699931.1:n.2936C>A
ENST00000699951.1:c.*604C>A ENSP00000514706.1:n.*604C>A
ENST00000699952.1:c.803+10069C>A ENSP00000514707.1:n.803+10069C>A
ENST00000699953.1:c.*615C>A ENSP00000514708.1:n.*615C>A
ENST00000699954.1:c.*809C>A ENSP00000514709.1:n.*809C>A
ENST00000265849.12:c.1508C>A MANE Select ENSP00000265849.7:p.Ser503Tyr
ENST00000642292.1:c.1103C>A ENSP00000495524.1:p.Ser368Tyr
ENST00000642456.1:c.1103C>A ENSP00000493814.1:p.Ser368Tyr
ENST00000643595.1:c.*907C>A ENSP00000494497.1:n.*907C>A
ENST00000644110.1:c.1190C>A ENSP00000496392.1:p.Ser397Tyr
ENST00000265849.11:c.1508C>A ENSP00000265849.7:p.Ser503Tyr
ENST00000382321.5:c.804-4266C>A ENSP00000371758.4:n.804-4266C>A
ENST00000406569.7:n.1508C>A
ENST00000441476.6:c.1190C>A ENSP00000392843.2:p.Ser397Tyr
ENST00000469652.1:n.63-4352C>A
NM_000535.5:c.1508C>A , LRG_161t1:c.1508C>A NP_000526.1:p.Ser503Tyr
NR_003085.2:n.1590C>A
XM_006715742.2:c.1502C>A XP_006715805.1:p.Ser501Tyr
XM_006715744.2:c.575C>A XP_006715807.1:p.Ser192Tyr
XM_011515427.1:c.1553C>A XP_011513729.1:p.Ser518Tyr
XM_011515428.1:c.1397C>A XP_011513730.1:p.Ser466Tyr
XM_011515429.1:c.1190C>A XP_011513731.1:p.Ser397Tyr
XM_011515430.1:c.1190C>A XP_011513732.1:p.Ser397Tyr
NM_000535.6:c.1508C>A NP_000526.2:p.Ser503Tyr
NM_001322003.1:c.1103C>A NP_001308932.1:p.Ser368Tyr
NM_001322004.1:c.1103C>A NP_001308933.1:p.Ser368Tyr
NM_001322005.1:c.1103C>A NP_001308934.1:p.Ser368Tyr
NM_001322006.1:c.1352C>A NP_001308935.1:p.Ser451Tyr
NM_001322007.1:c.1190C>A NP_001308936.1:p.Ser397Tyr
NM_001322008.1:c.1190C>A NP_001308937.1:p.Ser397Tyr
NM_001322009.1:c.1103C>A NP_001308938.1:p.Ser368Tyr
NM_001322010.1:c.947C>A NP_001308939.1:p.Ser316Tyr
NM_001322011.1:c.575C>A NP_001308940.1:p.Ser192Tyr
NM_001322012.1:c.575C>A NP_001308941.1:p.Ser192Tyr
NM_001322013.1:c.935C>A NP_001308942.1:p.Ser312Tyr
NM_001322014.1:c.1508C>A NP_001308943.1:p.Ser503Tyr
NM_001322015.1:c.1199C>A NP_001308944.1:p.Ser400Tyr
NR_136154.1:n.1595C>A
XM_006715744.4:c.575C>A XP_006715807.1:p.Ser192Tyr
XM_017012342.2:c.575C>A XP_016867831.1:p.Ser192Tyr
XM_024446800.1:c.947C>A XP_024302568.1:p.Ser316Tyr
NM_000535.7:c.1508C>A MANE Select NP_000526.2:p.Ser503Tyr
NM_001322003.2:c.1103C>A NP_001308932.1:p.Ser368Tyr
NM_001322004.2:c.1103C>A NP_001308933.1:p.Ser368Tyr
NM_001322005.2:c.1103C>A NP_001308934.1:p.Ser368Tyr
NM_001322006.2:c.1352C>A NP_001308935.1:p.Ser451Tyr
NM_001322008.2:c.1190C>A NP_001308937.1:p.Ser397Tyr
NM_001322009.2:c.1103C>A NP_001308938.1:p.Ser368Tyr
NM_001322010.2:c.947C>A NP_001308939.1:p.Ser316Tyr
NM_001322011.2:c.575C>A NP_001308940.1:p.Ser192Tyr
NM_001322012.2:c.575C>A NP_001308941.1:p.Ser192Tyr
NM_001322013.2:c.935C>A NP_001308942.1:p.Ser312Tyr
NM_001322014.2:c.1508C>A NP_001308943.1:p.Ser503Tyr
NM_001322015.2:c.1199C>A NP_001308944.1:p.Ser400Tyr
NM_001322007.2:c.1190C>A NP_001308936.1:p.Ser397Tyr