Canonical Allele Identifier: CA043660
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 484305
dbSNP Id: rs752122569
gnomAD v2: 7-6026946-G-T
gnomAD v3: 7-5987315-G-T
gnomAD v4: 7-5987315-G-T

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987315G>T , CM000669.2:g.5987315G>T GRCh38
NC_000007.13:g.6026946G>T , CM000669.1:g.6026946G>T GRCh37
NC_000007.12:g.5993472G>T NCBI36
NG_008466.1:g.26792C>A , LRG_161:g.26792C>A

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*846C>A ENSP00000514615.2:n.*846C>A
ENST00000699840.2:c.1447C>A ENSP00000514638.2:p.Pro483Thr
ENST00000699930.2:c.1342C>A ENSP00000514695.2:p.Pro448Thr
ENST00000406569.8:c.1450C>A ENSP00000514464.1:p.Pro484Thr
ENST00000644110.2:c.*1044C>A ENSP00000496392.2:n.*1044C>A
ENST00000699752.1:c.1294C>A ENSP00000514561.1:p.Pro432Thr
ENST00000699753.1:c.*871C>A ENSP00000514562.1:n.*871C>A
ENST00000699754.1:c.1252C>A ENSP00000514563.1:p.Pro418Thr
ENST00000699755.1:c.*849C>A ENSP00000514564.1:n.*849C>A
ENST00000699756.1:c.*1037C>A ENSP00000514565.1:n.*1037C>A
ENST00000699757.1:c.*707C>A ENSP00000514566.1:n.*707C>A
ENST00000699758.1:c.*707C>A ENSP00000514567.1:n.*707C>A
ENST00000699759.1:n.2304C>A
ENST00000699760.1:c.1132C>A ENSP00000514568.1:p.Pro378Thr
ENST00000699761.1:c.1045C>A ENSP00000514569.1:p.Pro349Thr
ENST00000699762.1:c.877C>A ENSP00000514570.1:p.Pro293Thr
ENST00000699763.1:c.*540C>A ENSP00000514571.1:n.*540C>A
ENST00000699764.1:c.1450C>A ENSP00000514572.1:p.Pro484Thr
ENST00000699765.1:c.*546C>A ENSP00000514573.1:n.*546C>A
ENST00000699766.1:c.1450C>A ENSP00000514574.1:p.Pro484Thr
ENST00000699767.1:c.1450C>A ENSP00000514575.1:p.Pro484Thr
ENST00000699768.1:c.1450C>A ENSP00000514576.1:p.Pro484Thr
ENST00000699811.1:c.1045C>A ENSP00000514614.1:p.Pro349Thr
ENST00000699813.1:n.1563C>A
ENST00000699814.1:c.1073C>A
ENST00000699815.1:c.*981C>A ENSP00000514616.1:n.*981C>A
ENST00000699816.1:c.*340C>A ENSP00000514617.1:n.*340C>A
ENST00000699817.1:c.*1044C>A ENSP00000514618.1:n.*1044C>A
ENST00000699818.1:c.1045C>A ENSP00000514619.1:p.Pro349Thr
ENST00000699819.1:c.*607C>A ENSP00000514620.1:n.*607C>A
ENST00000699820.1:c.1144+2485C>A ENSP00000514621.1:n.1144+2485C>A
ENST00000699821.1:c.1045C>A ENSP00000514622.1:p.Pro349Thr
ENST00000699822.1:c.*902C>A ENSP00000514623.1:n.*902C>A
ENST00000699823.1:c.1045C>A ENSP00000514624.1:p.Pro349Thr
ENST00000699824.1:c.*953C>A ENSP00000514625.1:n.*953C>A
ENST00000699825.1:c.889C>A ENSP00000514626.1:p.Pro297Thr
ENST00000699826.1:c.*849C>A ENSP00000514627.1:n.*849C>A
ENST00000699827.1:c.1282C>A ENSP00000514628.1:p.Pro428Thr
ENST00000699828.1:c.*540C>A ENSP00000514629.1:n.*540C>A
ENST00000699833.1:n.3222C>A
ENST00000699837.1:c.1045C>A ENSP00000514635.1:p.Pro349Thr
ENST00000699838.1:c.*1350C>A ENSP00000514636.1:n.*1350C>A
ENST00000699839.1:c.1636C>A ENSP00000514637.1:p.Pro546Thr
ENST00000699916.1:c.*707C>A ENSP00000514684.1:n.*707C>A
ENST00000699917.1:c.*899C>A ENSP00000514685.1:n.*899C>A
ENST00000699918.1:c.*951C>A ENSP00000514686.1:n.*951C>A
ENST00000699919.1:c.*1037C>A ENSP00000514687.1:n.*1037C>A
ENST00000699920.1:c.*1086C>A ENSP00000514688.1:n.*1086C>A
ENST00000699928.1:c.989-4324C>A ENSP00000514693.1:n.989-4324C>A
ENST00000699929.1:c.*751C>A ENSP00000514694.1:n.*751C>A
ENST00000699930.1:c.1342C>A ENSP00000514695.1:p.Pro448Thr
ENST00000699931.1:n.2878C>A
ENST00000699951.1:c.*546C>A ENSP00000514706.1:n.*546C>A
ENST00000699952.1:c.803+10011C>A ENSP00000514707.1:n.803+10011C>A
ENST00000699953.1:c.*557C>A ENSP00000514708.1:n.*557C>A
ENST00000699954.1:c.*751C>A ENSP00000514709.1:n.*751C>A
ENST00000265849.12:c.1450C>A MANE Select ENSP00000265849.7:p.Pro484Thr
ENST00000642292.1:c.1045C>A ENSP00000495524.1:p.Pro349Thr
ENST00000642456.1:c.1045C>A ENSP00000493814.1:p.Pro349Thr
ENST00000643595.1:c.*849C>A ENSP00000494497.1:n.*849C>A
ENST00000644110.1:c.1132C>A ENSP00000496392.1:p.Pro378Thr
ENST00000265849.11:c.1450C>A ENSP00000265849.7:p.Pro484Thr
ENST00000382321.5:c.804-4324C>A ENSP00000371758.4:n.804-4324C>A
ENST00000406569.7:n.1450C>A
ENST00000441476.6:c.1132C>A ENSP00000392843.2:p.Pro378Thr
ENST00000469652.1:n.63-4410C>A
NM_000535.5:c.1450C>A , LRG_161t1:c.1450C>A NP_000526.1:p.Pro484Thr
NR_003085.2:n.1532C>A
XM_006715742.2:c.1444C>A XP_006715805.1:p.Pro482Thr
XM_006715744.2:c.517C>A XP_006715807.1:p.Pro173Thr
XM_011515427.1:c.1495C>A XP_011513729.1:p.Pro499Thr
XM_011515428.1:c.1339C>A XP_011513730.1:p.Pro447Thr
XM_011515429.1:c.1132C>A XP_011513731.1:p.Pro378Thr
XM_011515430.1:c.1132C>A XP_011513732.1:p.Pro378Thr
NM_000535.6:c.1450C>A NP_000526.2:p.Pro484Thr
NM_001322003.1:c.1045C>A NP_001308932.1:p.Pro349Thr
NM_001322004.1:c.1045C>A NP_001308933.1:p.Pro349Thr
NM_001322005.1:c.1045C>A NP_001308934.1:p.Pro349Thr
NM_001322006.1:c.1294C>A NP_001308935.1:p.Pro432Thr
NM_001322007.1:c.1132C>A NP_001308936.1:p.Pro378Thr
NM_001322008.1:c.1132C>A NP_001308937.1:p.Pro378Thr
NM_001322009.1:c.1045C>A NP_001308938.1:p.Pro349Thr
NM_001322010.1:c.889C>A NP_001308939.1:p.Pro297Thr
NM_001322011.1:c.517C>A NP_001308940.1:p.Pro173Thr
NM_001322012.1:c.517C>A NP_001308941.1:p.Pro173Thr
NM_001322013.1:c.877C>A NP_001308942.1:p.Pro293Thr
NM_001322014.1:c.1450C>A NP_001308943.1:p.Pro484Thr
NM_001322015.1:c.1141C>A NP_001308944.1:p.Pro381Thr
NR_136154.1:n.1537C>A
XM_006715744.4:c.517C>A XP_006715807.1:p.Pro173Thr
XM_017012342.2:c.517C>A XP_016867831.1:p.Pro173Thr
XM_024446800.1:c.889C>A XP_024302568.1:p.Pro297Thr
NM_000535.7:c.1450C>A MANE Select NP_000526.2:p.Pro484Thr
NM_001322003.2:c.1045C>A NP_001308932.1:p.Pro349Thr
NM_001322004.2:c.1045C>A NP_001308933.1:p.Pro349Thr
NM_001322005.2:c.1045C>A NP_001308934.1:p.Pro349Thr
NM_001322006.2:c.1294C>A NP_001308935.1:p.Pro432Thr
NM_001322008.2:c.1132C>A NP_001308937.1:p.Pro378Thr
NM_001322009.2:c.1045C>A NP_001308938.1:p.Pro349Thr
NM_001322010.2:c.889C>A NP_001308939.1:p.Pro297Thr
NM_001322011.2:c.517C>A NP_001308940.1:p.Pro173Thr
NM_001322012.2:c.517C>A NP_001308941.1:p.Pro173Thr
NM_001322013.2:c.877C>A NP_001308942.1:p.Pro293Thr
NM_001322014.2:c.1450C>A NP_001308943.1:p.Pro484Thr
NM_001322015.2:c.1141C>A NP_001308944.1:p.Pro381Thr
NM_001322007.2:c.1132C>A NP_001308936.1:p.Pro378Thr