Canonical Allele Identifier: CA022206

Gene: MSH2

Linked Data

• ClinVar Variation Id: 91200
• ClinVar RCV Id: RCV000213494 ; RCV000662531 ; RCV000759121 ; RCV001088125
• dbSNP Id: rs587779180
• ExAC: 2:47639669 T / C
• gnomAD v2: 2-47639669-T-C
• gnomAD v3: 2-47412530-T-C
• gnomAD v4: 2-47412530-T-C
• MyVariant Identifiers: chr2:g.47639669T>C (hg19) ; chr2:g.47412530T>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47412530T>C , CM000664.2:g.47412530T>C	GRCh38
NC_000002.11:g.47639669T>C , CM000664.1:g.47639669T>C	GRCh37
NC_000002.10:g.47493173T>C	NCBI36
NG_007110.2:g.14407T>C , LRG_218:g.14407T>C

Transcript Alleles

HGVS	Amino-acid change
ENST00000644900.2:c.762T>C	ENSP00000495641.2:p.Asn254=
ENST00000233146.7:c.762T>C MANE Select	ENSP00000233146.2:p.Asn254=
ENST00000543555.6:c.564T>C	ENSP00000442697.1:p.Asn188=
ENST00000644092.1:c.762T>C	ENSP00000496351.1:p.Asn254=
ENST00000645339.1:c.762T>C	ENSP00000496441.1:p.Asn254=
ENST00000645506.1:c.762T>C	ENSP00000495455.1:p.Asn254=
ENST00000646415.1:c.762T>C	ENSP00000495543.1:p.Asn254=
ENST00000233146.6:c.762T>C	ENSP00000233146.2:p.Asn254=
ENST00000406134.5:c.762T>C	ENSP00000384199.1:p.Asn254=
ENST00000543555.5:c.564T>C	ENSP00000442697.1:p.Asn188=
ENST00000610696.4:c.762T>C	ENSP00000483159.1:p.Asn254=
ENST00000613514.4:c.762T>C	ENSP00000484137.1:p.Asn254=
ENST00000617333.3:c.762T>C	ENSP00000482468.1:p.Asn254=
ENST00000617938.4:c.762T>C	ENSP00000481158.1:p.Asn254=
ENST00000621359.2:c.762T>C	ENSP00000481416.1:p.Asn254=
NM_000251.2:c.762T>C , LRG_218t1:c.762T>C	NP_000242.1:p.Asn254=
NM_001258281.1:c.564T>C	NP_001245210.1:p.Asn188=
XM_005264332.2:c.762T>C	XP_005264389.2:p.Asn254=
XM_011532867.1:c.762T>C	XP_011531169.1:p.Asn254=
XR_939685.1:n.834T>C
XM_005264332.4:c.762T>C	XP_005264389.2:p.Asn254=
XM_011532867.2:c.762T>C	XP_011531169.1:p.Asn254=
XR_001738747.2:n.824T>C
XR_939685.2:n.824T>C
NM_000251.3:c.762T>C MANE Select	NP_000242.1:p.Asn254=