Canonical Allele Identifier: CA021209

Gene: MSH2

Linked Data

• ClinVar Variation Id: 91108
• ClinVar RCV Id: RCV000076611 ; RCV001183049
• dbSNP Id: rs63750214
• ExAC: 2:47637354 T / G
• gnomAD v2: 2-47637354-T-G
• gnomAD v4: 2-47410215-T-G
• MyVariant Identifiers: chr2:g.47637354T>G (hg19) ; chr2:g.47410215T>G (hg38)
• PubMed: PMID:22949379

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47410215T>G , CM000664.2:g.47410215T>G	GRCh38
NC_000002.11:g.47637354T>G , CM000664.1:g.47637354T>G	GRCh37
NC_000002.10:g.47490858T>G	NCBI36
NG_007110.2:g.12092T>G , LRG_218:g.12092T>G

Transcript Alleles

HGVS	Amino-acid change
ENST00000644900.2:c.488T>G	ENSP00000495641.2:p.Val163Gly
ENST00000233146.7:c.488T>G MANE Select	ENSP00000233146.2:p.Val163Gly
ENST00000543555.6:c.290T>G	ENSP00000442697.1:p.Val97Gly
ENST00000644092.1:c.488T>G	ENSP00000496351.1:p.Val163Gly
ENST00000645339.1:c.488T>G	ENSP00000496441.1:p.Val163Gly
ENST00000645506.1:c.488T>G	ENSP00000495455.1:p.Val163Gly
ENST00000646415.1:c.488T>G	ENSP00000495543.1:p.Val163Gly
ENST00000233146.6:c.488T>G	ENSP00000233146.2:p.Val163Gly
ENST00000406134.5:c.488T>G	ENSP00000384199.1:p.Val163Gly
ENST00000454849.5:c.290T>G	ENSP00000411482.1:p.Val97Gly
ENST00000543555.5:c.290T>G	ENSP00000442697.1:p.Val97Gly
ENST00000610696.4:c.488T>G	ENSP00000483159.1:p.Val163Gly
ENST00000613514.4:c.488T>G	ENSP00000484137.1:p.Val163Gly
ENST00000617333.3:c.488T>G	ENSP00000482468.1:p.Val163Gly
ENST00000617938.4:c.488T>G	ENSP00000481158.1:p.Val163Gly
ENST00000621359.2:c.488T>G	ENSP00000481416.1:p.Val163Gly
NM_000251.2:c.488T>G , LRG_218t1:c.488T>G	NP_000242.1:p.Val163Gly
NM_001258281.1:c.290T>G	NP_001245210.1:p.Val97Gly
XM_005264332.2:c.488T>G	XP_005264389.2:p.Val163Gly
XM_011532867.1:c.488T>G	XP_011531169.1:p.Val163Gly
XR_939685.1:n.560T>G
XM_005264332.4:c.488T>G	XP_005264389.2:p.Val163Gly
XM_011532867.2:c.488T>G	XP_011531169.1:p.Val163Gly
XR_001738747.2:n.550T>G
XR_939685.2:n.550T>G
NM_000251.3:c.488T>G MANE Select	NP_000242.1:p.Val163Gly