Canonical Allele Identifier: CA017731
Gene: TSC2 HGNC NCBI

Linked Data

ClinVar Variation Id: 49217
dbSNP Id: rs45485999
gnomAD v2: 16-2103379-C-T
gnomAD v3: 16-2053378-C-T
gnomAD v4: 16-2053378-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000016.10:g.2053378C>T , CM000678.2:g.2053378C>T GRCh38
NC_000016.9:g.2103379C>T , CM000678.1:g.2103379C>T GRCh37
NC_000016.8:g.2043380C>T NCBI36
NG_005895.1:g.9073C>T , LRG_487:g.9073C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000568566.6:c.262C>T ENSP00000455997.2:p.Leu88=
ENST00000642206.2:c.226-9C>T ENSP00000495146.2:n.226-9C>T
ENST00000642365.2:c.262C>T ENSP00000495459.2:p.Leu88=
ENST00000644417.2:c.262C>T ENSP00000493912.2:p.Leu88=
ENST00000646464.2:c.226-2602C>T ENSP00000496610.2:n.226-2602C>T
ENST00000219476.9:c.262C>T MANE Select ENSP00000219476.3:p.Leu88=
ENST00000350773.9:c.262C>T ENSP00000344383.4:p.Leu88=
ENST00000401874.7:c.262C>T ENSP00000384468.2:p.Leu88=
ENST00000461648.3:n.372C>T
ENST00000568454.6:c.295C>T ENSP00000454487.1:p.Leu99=
ENST00000568692.2:n.142C>T
ENST00000642206.1:c.226-9C>T ENSP00000495146.1:n.226-9C>T
ENST00000642561.1:c.262C>T ENSP00000495099.1:p.Leu88=
ENST00000642797.1:c.262C>T ENSP00000493846.1:p.Leu88=
ENST00000642812.1:n.319C>T
ENST00000642936.1:c.262C>T ENSP00000494514.1:p.Leu88=
ENST00000643088.1:c.262C>T ENSP00000494747.1:p.Leu88=
ENST00000643149.1:n.372C>T
ENST00000643298.1:c.262C>T ENSP00000494393.1:p.Leu88=
ENST00000643745.1:c.262C>T ENSP00000495948.1:p.Leu88=
ENST00000643946.1:c.262C>T ENSP00000495927.1:p.Leu88=
ENST00000644043.1:c.262C>T ENSP00000496262.1:p.Leu88=
ENST00000644135.1:c.262C>T ENSP00000495644.1:p.Leu88=
ENST00000644222.1:n.349C>T
ENST00000644329.1:c.262C>T ENSP00000496611.1:p.Leu88=
ENST00000644335.1:c.262C>T ENSP00000496317.1:p.Leu88=
ENST00000644399.1:c.255C>T
ENST00000644665.1:n.379C>T
ENST00000645591.1:n.390C>T
ENST00000646388.1:c.262C>T ENSP00000495921.1:p.Leu88=
ENST00000647234.1:n.137C>T
ENST00000647242.1:n.87C>T
ENST00000219476.7:c.262C>T ENSP00000219476.3:p.Leu88=
ENST00000350773.8:c.262C>T ENSP00000344383.4:p.Leu88=
ENST00000382538.10:c.115C>T ENSP00000371978.6:p.Leu39=
ENST00000401874.6:c.262C>T ENSP00000384468.2:p.Leu88=
ENST00000439117.6:c.226-2818C>T ENSP00000406980.2:n.226-2818C>T
ENST00000439673.6:c.226-918C>T ENSP00000399232.2:n.226-918C>T
ENST00000461648.2:n.367C>T
ENST00000568454.5:c.295C>T ENSP00000454487.1:p.Leu99=
NM_000548.3:c.262C>T , LRG_487t1:c.262C>T NP_000539.2:p.Leu88=
NM_001077183.1:c.262C>T NP_001070651.1:p.Leu88=
NM_001114382.1:c.262C>T NP_001107854.1:p.Leu88=
XM_005255529.3:c.262C>T XP_005255586.2:p.Leu88=
XM_005255531.3:c.262C>T XP_005255588.2:p.Leu88=
XM_011522636.1:c.262C>T XP_011520938.1:p.Leu88=
XM_011522637.1:c.262C>T XP_011520939.1:p.Leu88=
XM_011522638.1:c.226-918C>T XP_011520940.1:n.226-918C>T
XM_011522639.1:c.262C>T XP_011520941.1:p.Leu88=
XM_011522640.1:c.262C>T XP_011520942.1:p.Leu88=
XM_011522641.1:c.226-918C>T XP_011520943.1:n.226-918C>T
NM_000548.4:c.262C>T NP_000539.2:p.Leu88=
NM_001077183.2:c.262C>T NP_001070651.1:p.Leu88=
NM_001114382.2:c.262C>T NP_001107854.1:p.Leu88=
NM_001318827.1:c.226-918C>T NP_001305756.1:n.226-918C>T
NM_001318829.1:c.115C>T NP_001305758.1:p.Leu39=
NM_001318831.1:c.-1-2818C>T NP_001305760.1:n.-1-2818C>T
NM_001318832.1:c.295C>T NP_001305761.1:p.Leu99=
NM_001363528.1:c.262C>T NP_001350457.1:p.Leu88=
NM_021055.2:c.262C>T NP_066399.2:p.Leu88=
XM_005255531.4:c.262C>T XP_005255588.2:p.Leu88=
XM_011522636.2:c.262C>T XP_011520938.1:p.Leu88=
XM_011522637.2:c.262C>T XP_011520939.1:p.Leu88=
XM_011522638.2:c.499-918C>T XP_011520940.2:n.499-918C>T
XM_011522639.2:c.262C>T XP_011520941.1:p.Leu88=
XM_011522640.2:c.262C>T XP_011520942.1:p.Leu88=
XM_017023615.1:c.262C>T XP_016879104.1:p.Leu88=
XM_017023616.1:c.262C>T XP_016879105.1:p.Leu88=
XM_017023617.1:c.499-918C>T XP_016879106.1:n.499-918C>T
XM_017023618.1:c.-1170C>T XP_016879107.1:n.-1170C>T
XM_024450413.1:c.262C>T XP_024306181.1:p.Leu88=
NM_000548.5:c.262C>T MANE Select NP_000539.2:p.Leu88=
NM_001370404.1:c.262C>T NP_001357333.1:p.Leu88=
NM_001370405.1:c.262C>T NP_001357334.1:p.Leu88=
NM_001077183.3:c.262C>T NP_001070651.1:p.Leu88=
NM_001114382.3:c.262C>T NP_001107854.1:p.Leu88=
NM_001318827.2:c.226-918C>T NP_001305756.1:n.226-918C>T
NM_001318829.2:c.115C>T NP_001305758.1:p.Leu39=
NM_001318831.2:c.-1-2818C>T NP_001305760.1:n.-1-2818C>T
NM_001318832.2:c.295C>T NP_001305761.1:p.Leu99=
NM_001363528.2:c.262C>T NP_001350457.1:p.Leu88=
NM_021055.3:c.262C>T NP_066399.2:p.Leu88=