Linked Data
ClinVar Variation Id:
186280
dbSNP Id:
rs786202829
gnomAD v2:
2-48030735-T-C
gnomAD v3:
2-47803596-T-C
gnomAD v4:
2-47803596-T-C
PubMed:
PMID:23621914
Genomic Alleles
| HGVS | Genome Assembly |
|---|---|
| NC_000002.12:g.47803596T>C , CM000664.2:g.47803596T>C | GRCh38 |
| NC_000002.11:g.48030735T>C , CM000664.1:g.48030735T>C | GRCh37 |
| NC_000002.10:g.47884239T>C | NCBI36 |
| NG_007111.1:g.25450T>C , LRG_219:g.25450T>C |
Transcript Alleles
| HGVS | Amino-acid Change | |
|---|---|---|
| ENST00000411819.2:c.3052T>C (MSH6) | ENSP00000406248.2:p.Cys1018Arg | |
| ENST00000420813.6:c.3052T>C (MSH6) | ENSP00000390382.2:p.Cys1018Arg | |
| ENST00000455383.6:c.3052T>C (MSH6) | ENSP00000397484.2:p.Cys1018Arg | |
| ENST00000700004.2:c.3173-2022T>C (MSH6) | ENSP00000514752.2:n.3173-2022T>C | |
| ENST00000699999.1:n.3433T>C (MSH6) | ||
| ENST00000700000.1:c.1783T>C (MSH6) | ENSP00000514749.1:p.Cys595Arg | |
| ENST00000700002.1:c.3355T>C (MSH6) | ENSP00000514750.1:p.Cys1119Arg | |
| ENST00000700003.1:c.804T>C (MSH6) | ENSP00000514751.1:n.804T>C | |
| ENST00000700004.1:c.2330-2022T>C (MSH6) | ENSP00000514752.1:n.2330-2022T>C | |
| ENST00000700005.1:n.2200T>C (MSH6) | ||
| ENST00000700006.1:n.2197T>C (MSH6) | ||
| ENST00000700007.1:n.1354T>C (MSH6) | ||
| ENST00000700008.1:n.928T>C (MSH6) | ||
| ENST00000700009.1:n.927T>C (MSH6) | ||
| ENST00000700010.1:n.758T>C (MSH6) | ||
| ENST00000700011.1:n.829T>C (MSH6) | ||
| ENST00000234420.11:c.3349T>C (MSH6) MANE Select | ENSP00000234420.5:p.Cys1117Arg | |
| ENST00000540021.6:c.2959T>C (MSH6) | ENSP00000446475.1:p.Cys987Arg | |
| ENST00000652107.1:c.3052T>C (MSH6) | ENSP00000498629.1:p.Cys1018Arg | |
| ENST00000673637.1:c.3052T>C (MSH6) | ENSP00000501310.1:p.Cys1018Arg | |
| ENST00000234420.9:c.3349T>C (MSH6) | ENSP00000234420.4:p.Cys1117Arg | |
| ENST00000405808.5:c.169+4599A>G (FBXO11) | ENSP00000385127.1:n.169+4599A>G | |
| ENST00000434234.5:c.*124+4398A>G (FBXO11) | ENSP00000402692.1:n.*124+4398A>G | |
| ENST00000445503.5:c.*2696T>C (MSH6) | ENSP00000405294.1:n.*2696T>C | |
| ENST00000538136.1:c.2443T>C (MSH6) | ENSP00000438580.1:p.Cys815Arg | |
| ENST00000540021.5:c.2959T>C (MSH6) | ENSP00000446475.1:p.Cys987Arg | |
| ENST00000614496.4:c.2443T>C (MSH6) | ENSP00000477844.1:p.Cys815Arg | |
| ENST00000622629.4:c.253T>C (MSH6) | ENSP00000482078.1:p.Cys85Arg | |
| NM_000179.2:c.3349T>C , LRG_219t1:c.3349T>C (MSH6) | NP_000170.1:p.Cys1117Arg | |
| NM_001281492.1:c.2959T>C (MSH6) | NP_001268421.1:p.Cys987Arg | |
| NM_001281493.1:c.2443T>C (MSH6) | NP_001268422.1:p.Cys815Arg | |
| NM_001281494.1:c.2443T>C (MSH6) | NP_001268423.1:p.Cys815Arg | |
| XM_005264271.1:c.3052T>C (MSH6) | XP_005264328.1:p.Cys1018Arg | |
| XM_011532798.1:c.3166T>C (MSH6) | XP_011531100.1:p.Cys1056Arg | |
| XM_011532799.1:c.3052T>C (MSH6) | XP_011531101.1:p.Cys1018Arg | |
| XM_011532800.1:c.3052T>C (MSH6) | XP_011531102.1:p.Cys1018Arg | |
| XM_024452819.1:c.3349T>C (MSH6) | XP_024308587.1:p.Cys1117Arg | |
| XM_024452820.1:c.3166T>C (MSH6) | XP_024308588.1:p.Cys1056Arg | |
| XM_024452821.1:c.3052T>C (MSH6) | XP_024308589.1:p.Cys1018Arg | |
| XM_024452822.1:c.2443T>C (MSH6) | XP_024308590.1:p.Cys815Arg | |
| NM_000179.3:c.3349T>C (MSH6) MANE Select | NP_000170.1:p.Cys1117Arg | |
| NM_001281492.2:c.2959T>C (MSH6) | NP_001268421.1:p.Cys987Arg | |
| NM_001281493.2:c.2443T>C (MSH6) | NP_001268422.1:p.Cys815Arg | |
| NM_001281494.2:c.2443T>C (MSH6) | NP_001268423.1:p.Cys815Arg |