Canonical Allele Identifier: CA011990

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 187384
• ClinVar RCV Id: RCV000167108 ; RCV000213713 ; RCV000805949
• dbSNP Id: rs781243845
• ExAC: 2:48030601 G / T
• gnomAD v2: 2-48030601-G-T
• gnomAD v4: 2-47803462-G-T
• MyVariant Identifiers: chr2:g.48030601G>T (hg19) ; chr2:g.47803462G>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47803462G>T , CM000664.2:g.47803462G>T	GRCh38
NC_000002.11:g.48030601G>T , CM000664.1:g.48030601G>T	GRCh37
NC_000002.10:g.47884105G>T	NCBI36
NG_007111.1:g.25316G>T , LRG_219:g.25316G>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000411819.2:c.2918G>T (MSH6)	ENSP00000406248.2:p.Gly973Val
ENST00000420813.6:c.2918G>T (MSH6)	ENSP00000390382.2:p.Gly973Val
ENST00000455383.6:c.2918G>T (MSH6)	ENSP00000397484.2:p.Gly973Val
ENST00000700004.2:c.3173-2156G>T (MSH6)	ENSP00000514752.2:n.3173-2156G>T
ENST00000699999.1:n.3299G>T (MSH6)
ENST00000700000.1:c.1649G>T (MSH6)	ENSP00000514749.1:p.Gly550Val
ENST00000700002.1:c.3221G>T (MSH6)	ENSP00000514750.1:p.Gly1074Val
ENST00000700003.1:c.670G>T (MSH6)	ENSP00000514751.1:p.Val224Phe
ENST00000700004.1:c.2330-2156G>T (MSH6)	ENSP00000514752.1:n.2330-2156G>T
ENST00000700005.1:n.2066G>T (MSH6)
ENST00000700006.1:n.2063G>T (MSH6)
ENST00000700007.1:n.1220G>T (MSH6)
ENST00000700008.1:n.794G>T (MSH6)
ENST00000700009.1:n.793G>T (MSH6)
ENST00000700010.1:n.624G>T (MSH6)
ENST00000700011.1:n.695G>T (MSH6)
ENST00000234420.11:c.3215G>T (MSH6) MANE Select	ENSP00000234420.5:p.Gly1072Val
ENST00000540021.6:c.2825G>T (MSH6)	ENSP00000446475.1:p.Gly942Val
ENST00000652107.1:c.2918G>T (MSH6)	ENSP00000498629.1:p.Gly973Val
ENST00000673637.1:c.2918G>T (MSH6)	ENSP00000501310.1:p.Gly973Val
ENST00000234420.9:c.3215G>T (MSH6)	ENSP00000234420.4:p.Gly1072Val
ENST00000405808.5:c.169+4733C>A (FBXO11)	ENSP00000385127.1:n.169+4733C>A
ENST00000434234.5:c.*124+4532C>A (FBXO11)	ENSP00000402692.1:n.*124+4532C>A
ENST00000445503.5:c.*2562G>T (MSH6)	ENSP00000405294.1:n.*2562G>T
ENST00000538136.1:c.2309G>T (MSH6)	ENSP00000438580.1:p.Gly770Val
ENST00000540021.5:c.2825G>T (MSH6)	ENSP00000446475.1:p.Gly942Val
ENST00000614496.4:c.2309G>T (MSH6)	ENSP00000477844.1:p.Gly770Val
ENST00000622629.4:c.119G>T (MSH6)	ENSP00000482078.1:p.Gly40Val
NM_000179.2:c.3215G>T , LRG_219t1:c.3215G>T (MSH6)	NP_000170.1:p.Gly1072Val
NM_001281492.1:c.2825G>T (MSH6)	NP_001268421.1:p.Gly942Val
NM_001281493.1:c.2309G>T (MSH6)	NP_001268422.1:p.Gly770Val
NM_001281494.1:c.2309G>T (MSH6)	NP_001268423.1:p.Gly770Val
XM_005264271.1:c.2918G>T (MSH6)	XP_005264328.1:p.Gly973Val
XM_011532798.1:c.3032G>T (MSH6)	XP_011531100.1:p.Gly1011Val
XM_011532799.1:c.2918G>T (MSH6)	XP_011531101.1:p.Gly973Val
XM_011532800.1:c.2918G>T (MSH6)	XP_011531102.1:p.Gly973Val
XM_024452819.1:c.3215G>T (MSH6)	XP_024308587.1:p.Gly1072Val
XM_024452820.1:c.3032G>T (MSH6)	XP_024308588.1:p.Gly1011Val
XM_024452821.1:c.2918G>T (MSH6)	XP_024308589.1:p.Gly973Val
XM_024452822.1:c.2309G>T (MSH6)	XP_024308590.1:p.Gly770Val
NM_000179.3:c.3215G>T (MSH6) MANE Select	NP_000170.1:p.Gly1072Val
NM_001281492.2:c.2825G>T (MSH6)	NP_001268421.1:p.Gly942Val
NM_001281493.2:c.2309G>T (MSH6)	NP_001268422.1:p.Gly770Val
NM_001281494.2:c.2309G>T (MSH6)	NP_001268423.1:p.Gly770Val