Canonical Allele Identifier: CA010119
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 135066
dbSNP Id: rs115670442
gnomAD v2: 7-6026688-T-C
gnomAD v3: 7-5987057-T-C
gnomAD v4: 7-5987057-T-C

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987057T>C , CM000669.2:g.5987057T>C GRCh38
NC_000007.13:g.6026688T>C , CM000669.1:g.6026688T>C GRCh37
NC_000007.12:g.5993214T>C NCBI36
NG_008466.1:g.27050A>G , LRG_161:g.27050A>G

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1104A>G ENSP00000514615.2:n.*1104A>G
ENST00000699840.2:c.1705A>G ENSP00000514638.2:p.Asn569Asp
ENST00000699930.2:c.1600A>G ENSP00000514695.2:p.Asn534Asp
ENST00000406569.8:c.1678+30A>G ENSP00000514464.1:n.1678+30A>G
ENST00000644110.2:c.*1302A>G ENSP00000496392.2:n.*1302A>G
ENST00000699752.1:c.1552A>G ENSP00000514561.1:p.Asn518Asp
ENST00000699753.1:c.*1129A>G ENSP00000514562.1:n.*1129A>G
ENST00000699754.1:c.1510A>G ENSP00000514563.1:p.Asn504Asp
ENST00000699755.1:c.*1107A>G ENSP00000514564.1:n.*1107A>G
ENST00000699756.1:c.*1295A>G ENSP00000514565.1:n.*1295A>G
ENST00000699757.1:c.*965A>G ENSP00000514566.1:n.*965A>G
ENST00000699758.1:c.*965A>G ENSP00000514567.1:n.*965A>G
ENST00000699759.1:n.2562A>G
ENST00000699760.1:c.1390A>G ENSP00000514568.1:p.Asn464Asp
ENST00000699761.1:c.1303A>G ENSP00000514569.1:p.Asn435Asp
ENST00000699762.1:c.1135A>G ENSP00000514570.1:p.Asn379Asp
ENST00000699763.1:c.*798A>G ENSP00000514571.1:n.*798A>G
ENST00000699764.1:c.*26A>G ENSP00000514572.1:n.*26A>G
ENST00000699765.1:c.*804A>G ENSP00000514573.1:n.*804A>G
ENST00000699766.1:c.1708A>G ENSP00000514574.1:p.Asn570Asp
ENST00000699767.1:c.1708A>G ENSP00000514575.1:p.Asn570Asp
ENST00000699768.1:c.1708A>G ENSP00000514576.1:p.Asn570Asp
ENST00000699811.1:c.1303A>G ENSP00000514614.1:p.Asn435Asp
ENST00000699813.1:n.1821A>G
ENST00000699814.1:c.1331A>G
ENST00000699815.1:c.*1239A>G ENSP00000514616.1:n.*1239A>G
ENST00000699816.1:c.*598A>G ENSP00000514617.1:n.*598A>G
ENST00000699817.1:c.*1302A>G ENSP00000514618.1:n.*1302A>G
ENST00000699818.1:c.1303A>G ENSP00000514619.1:p.Asn435Asp
ENST00000699819.1:c.*865A>G ENSP00000514620.1:n.*865A>G
ENST00000699820.1:c.1144+2743A>G ENSP00000514621.1:n.1144+2743A>G
ENST00000699821.1:c.1303A>G ENSP00000514622.1:p.Asn435Asp
ENST00000699822.1:c.*1160A>G ENSP00000514623.1:n.*1160A>G
ENST00000699823.1:c.1303A>G ENSP00000514624.1:p.Asn435Asp
ENST00000699824.1:c.*1211A>G ENSP00000514625.1:n.*1211A>G
ENST00000699825.1:c.1147A>G ENSP00000514626.1:p.Asn383Asp
ENST00000699826.1:c.*1107A>G ENSP00000514627.1:n.*1107A>G
ENST00000699827.1:c.1540A>G ENSP00000514628.1:p.Asn514Asp
ENST00000699828.1:c.*798A>G ENSP00000514629.1:n.*798A>G
ENST00000699833.1:n.3480A>G
ENST00000699837.1:c.1303A>G ENSP00000514635.1:p.Asn435Asp
ENST00000699838.1:c.*1608A>G ENSP00000514636.1:n.*1608A>G
ENST00000699839.1:c.1894A>G ENSP00000514637.1:p.Asn632Asp
ENST00000699916.1:c.*965A>G ENSP00000514684.1:n.*965A>G
ENST00000699917.1:c.*1157A>G ENSP00000514685.1:n.*1157A>G
ENST00000699918.1:c.*1209A>G ENSP00000514686.1:n.*1209A>G
ENST00000699919.1:c.*1295A>G ENSP00000514687.1:n.*1295A>G
ENST00000699920.1:c.*1344A>G ENSP00000514688.1:n.*1344A>G
ENST00000699928.1:c.989-4066A>G ENSP00000514693.1:n.989-4066A>G
ENST00000699929.1:c.*1009A>G ENSP00000514694.1:n.*1009A>G
ENST00000699930.1:c.1600A>G ENSP00000514695.1:p.Asn534Asp
ENST00000699931.1:n.3136A>G
ENST00000699951.1:c.*804A>G ENSP00000514706.1:n.*804A>G
ENST00000699952.1:c.803+10269A>G ENSP00000514707.1:n.803+10269A>G
ENST00000699953.1:c.*815A>G ENSP00000514708.1:n.*815A>G
ENST00000699954.1:c.*1009A>G ENSP00000514709.1:n.*1009A>G
ENST00000265849.12:c.1708A>G MANE Select ENSP00000265849.7:p.Asn570Asp
ENST00000642292.1:c.1303A>G ENSP00000495524.1:p.Asn435Asp
ENST00000642456.1:c.1303A>G ENSP00000493814.1:p.Asn435Asp
ENST00000643595.1:c.*1107A>G ENSP00000494497.1:n.*1107A>G
ENST00000644110.1:c.1390A>G ENSP00000496392.1:p.Asn464Asp
ENST00000265849.11:c.1708A>G ENSP00000265849.7:p.Asn570Asp
ENST00000382321.5:c.804-4066A>G ENSP00000371758.4:n.804-4066A>G
ENST00000406569.7:n.1678+30A>G
ENST00000441476.6:c.1390A>G ENSP00000392843.2:p.Asn464Asp
ENST00000469652.1:n.63-4152A>G
NM_000535.5:c.1708A>G , LRG_161t1:c.1708A>G NP_000526.1:p.Asn570Asp
NR_003085.2:n.1790A>G
XM_006715742.2:c.1702A>G XP_006715805.1:p.Asn568Asp
XM_006715744.2:c.775A>G XP_006715807.1:p.Asn259Asp
XM_011515427.1:c.1753A>G XP_011513729.1:p.Asn585Asp
XM_011515428.1:c.1597A>G XP_011513730.1:p.Asn533Asp
XM_011515429.1:c.1390A>G XP_011513731.1:p.Asn464Asp
XM_011515430.1:c.1390A>G XP_011513732.1:p.Asn464Asp
NM_000535.6:c.1708A>G NP_000526.2:p.Asn570Asp
NM_001322003.1:c.1303A>G NP_001308932.1:p.Asn435Asp
NM_001322004.1:c.1303A>G NP_001308933.1:p.Asn435Asp
NM_001322005.1:c.1303A>G NP_001308934.1:p.Asn435Asp
NM_001322006.1:c.1552A>G NP_001308935.1:p.Asn518Asp
NM_001322007.1:c.1390A>G NP_001308936.1:p.Asn464Asp
NM_001322008.1:c.1390A>G NP_001308937.1:p.Asn464Asp
NM_001322009.1:c.1303A>G NP_001308938.1:p.Asn435Asp
NM_001322010.1:c.1147A>G NP_001308939.1:p.Asn383Asp
NM_001322011.1:c.775A>G NP_001308940.1:p.Asn259Asp
NM_001322012.1:c.775A>G NP_001308941.1:p.Asn259Asp
NM_001322013.1:c.1135A>G NP_001308942.1:p.Asn379Asp
NM_001322014.1:c.1708A>G NP_001308943.1:p.Asn570Asp
NM_001322015.1:c.1399A>G NP_001308944.1:p.Asn467Asp
NR_136154.1:n.1795A>G
XM_006715744.4:c.775A>G XP_006715807.1:p.Asn259Asp
XM_017012342.2:c.775A>G XP_016867831.1:p.Asn259Asp
XM_024446800.1:c.1147A>G XP_024302568.1:p.Asn383Asp
NM_000535.7:c.1708A>G MANE Select NP_000526.2:p.Asn570Asp
NM_001322003.2:c.1303A>G NP_001308932.1:p.Asn435Asp
NM_001322004.2:c.1303A>G NP_001308933.1:p.Asn435Asp
NM_001322005.2:c.1303A>G NP_001308934.1:p.Asn435Asp
NM_001322006.2:c.1552A>G NP_001308935.1:p.Asn518Asp
NM_001322008.2:c.1390A>G NP_001308937.1:p.Asn464Asp
NM_001322009.2:c.1303A>G NP_001308938.1:p.Asn435Asp
NM_001322010.2:c.1147A>G NP_001308939.1:p.Asn383Asp
NM_001322011.2:c.775A>G NP_001308940.1:p.Asn259Asp
NM_001322012.2:c.775A>G NP_001308941.1:p.Asn259Asp
NM_001322013.2:c.1135A>G NP_001308942.1:p.Asn379Asp
NM_001322014.2:c.1708A>G NP_001308943.1:p.Asn570Asp
NM_001322015.2:c.1399A>G NP_001308944.1:p.Asn467Asp
NM_001322007.2:c.1390A>G NP_001308936.1:p.Asn464Asp