Canonical Allele Identifier: CA009179

Gene: MLH1

Linked Data

• ClinVar Variation Id: 127622
• ClinVar RCV Id: RCV000115475 ; RCV000535352 ; RCV000586644 ; RCV003460818 ; RCV001420716
• dbSNP Id: rs587779958
• ExAC: 3:37092112 C / T
• gnomAD v2: 3-37092112-C-T
• gnomAD v4: 3-37050621-C-T
• MyVariant Identifiers: chr3:g.37092112C>T (hg19) ; chr3:g.37050621C>T (hg38)
• PubMed: PMID:25318351

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.37050621C>T , CM000665.2:g.37050621C>T	GRCh38
NC_000003.11:g.37092112C>T , CM000665.1:g.37092112C>T	GRCh37
NC_000003.10:g.37067116C>T	NCBI36
NG_007109.2:g.62272C>T , LRG_216:g.62272C>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000413740.2:c.1803C>T	ENSP00000416476.2:p.Cys601=
ENST00000429117.6:c.1945C>T	ENSP00000407019.2:p.Pro649Ser
ENST00000456676.7:c.2032C>T	ENSP00000416687.3:p.Pro678Ser
ENST00000492474.6:c.1516C>T	ENSP00000518393.1:p.Pro506Ser
ENST00000616768.6:c.2146C>T	ENSP00000480669.3:p.Pro716Ser
ENST00000673673.2:c.2074C>T	ENSP00000500979.2:p.Pro692Ser
ENST00000231790.8:c.2239C>T MANE Select	ENSP00000231790.3:p.Pro747Ser
ENST00000413212.2:c.*1157C>T	ENSP00000400844.2:n.*1157C>T
ENST00000432299.6:c.*2071C>T	ENSP00000416783.1:n.*2071C>T
ENST00000447829.6:c.*1350C>T	ENSP00000399329.2:n.*1350C>T
ENST00000539477.6:c.1516C>T	ENSP00000443665.1:p.Pro506Ser
ENST00000616768.5:c.1183C>T	ENSP00000480669.2:p.Pro395Ser
ENST00000673673.1:c.2027C>T
ENST00000673741.1:n.1273C>T
ENST00000673889.1:n.1621C>T
ENST00000673897.1:c.*2031C>T	ENSP00000501109.1:n.*2031C>T
ENST00000673899.1:c.1507C>T	ENSP00000501030.1:p.Pro503Ser
ENST00000673947.1:c.*2379C>T	ENSP00000501304.1:n.*2379C>T
ENST00000673972.1:c.*2117C>T	ENSP00000501281.1:n.*2117C>T
ENST00000674019.1:c.1516C>T	ENSP00000501081.1:p.Pro506Ser
ENST00000674111.1:c.*468C>T	ENSP00000501162.1:n.*468C>T
ENST00000674125.1:n.950C>T
ENST00000231790.6:c.2239C>T	ENSP00000231790.2:p.Pro747Ser
ENST00000435176.5:c.1945C>T	ENSP00000402564.1:p.Pro649Ser
ENST00000455445.6:c.1516C>T	ENSP00000398272.2:p.Pro506Ser
ENST00000456676.6:c.2007C>T
ENST00000458205.6:c.1516C>T	ENSP00000402667.2:p.Pro506Ser
ENST00000536378.5:c.1516C>T	ENSP00000444286.2:p.Pro506Ser
ENST00000539477.5:c.1516C>T	ENSP00000443665.1:p.Pro506Ser
NM_000249.3:c.2239C>T , LRG_216t1:c.2239C>T	NP_000240.1:p.Pro747Ser
NM_001167617.1:c.1945C>T	NP_001161089.1:p.Pro649Ser
NM_001167618.1:c.1516C>T	NP_001161090.1:p.Pro506Ser
NM_001167619.1:c.1516C>T	NP_001161091.1:p.Pro506Ser
NM_001258271.1:c.2032C>T	NP_001245200.1:p.Pro678Ser
NM_001258273.1:c.1516C>T	NP_001245202.1:p.Pro506Ser
NM_001258274.1:c.1516C>T	NP_001245203.1:p.Pro506Ser
XM_005265161.1:c.2032C>T	XP_005265218.1:p.Pro678Ser
XM_005265163.1:c.1516C>T	XP_005265220.1:p.Pro506Ser
XM_005265164.1:c.1516C>T	XP_005265221.1:p.Pro506Ser
XM_005265166.1:c.1216C>T	XP_005265223.1:p.Pro406Ser
XM_011533727.1:c.1165C>T	XP_011532029.1:p.Pro389Ser
NM_001167617.2:c.1945C>T	NP_001161089.1:p.Pro649Ser
NM_001167618.2:c.1516C>T	NP_001161090.1:p.Pro506Ser
NM_001167619.2:c.1516C>T	NP_001161091.1:p.Pro506Ser
NM_001258274.2:c.1516C>T	NP_001245203.1:p.Pro506Ser
NM_001354615.1:c.1516C>T	NP_001341544.1:p.Pro506Ser
NM_001354616.1:c.1516C>T	NP_001341545.1:p.Pro506Ser
NM_001354617.1:c.1516C>T	NP_001341546.1:p.Pro506Ser
NM_001354618.1:c.1516C>T	NP_001341547.1:p.Pro506Ser
NM_001354619.1:c.1516C>T	NP_001341548.1:p.Pro506Ser
NM_001354620.1:c.1945C>T	NP_001341549.1:p.Pro649Ser
NM_001354621.1:c.1216C>T	NP_001341550.1:p.Pro406Ser
NM_001354622.1:c.1216C>T	NP_001341551.1:p.Pro406Ser
NM_001354623.1:c.1216C>T	NP_001341552.1:p.Pro406Ser
NM_001354624.1:c.1165C>T	NP_001341553.1:p.Pro389Ser
NM_001354625.1:c.1165C>T	NP_001341554.1:p.Pro389Ser
NM_001354626.1:c.1165C>T	NP_001341555.1:p.Pro389Ser
NM_001354627.1:c.1165C>T	NP_001341556.1:p.Pro389Ser
NM_001354628.1:c.2146C>T	NP_001341557.1:p.Pro716Ser
NM_001354629.1:c.2140C>T	NP_001341558.1:p.Pro714Ser
NM_001354630.1:c.2074C>T	NP_001341559.1:p.Pro692Ser
XM_005265161.2:c.2032C>T	XP_005265218.1:p.Pro678Ser
XM_017006450.2:c.1216C>T	XP_016861939.1:p.Pro406Ser
NM_000249.4:c.2239C>T MANE Select	NP_000240.1:p.Pro747Ser
NM_001167617.3:c.1945C>T	NP_001161089.1:p.Pro649Ser
NM_001167618.3:c.1516C>T	NP_001161090.1:p.Pro506Ser
NM_001167619.3:c.1516C>T	NP_001161091.1:p.Pro506Ser
NM_001258271.2:c.2032C>T	NP_001245200.1:p.Pro678Ser
NM_001258273.2:c.1516C>T	NP_001245202.1:p.Pro506Ser
NM_001258274.3:c.1516C>T	NP_001245203.1:p.Pro506Ser
NM_001354615.2:c.1516C>T	NP_001341544.1:p.Pro506Ser
NM_001354616.2:c.1516C>T	NP_001341545.1:p.Pro506Ser
NM_001354617.2:c.1516C>T	NP_001341546.1:p.Pro506Ser
NM_001354618.2:c.1516C>T	NP_001341547.1:p.Pro506Ser
NM_001354619.2:c.1516C>T	NP_001341548.1:p.Pro506Ser
NM_001354620.2:c.1945C>T	NP_001341549.1:p.Pro649Ser
NM_001354621.2:c.1216C>T	NP_001341550.1:p.Pro406Ser
NM_001354622.2:c.1216C>T	NP_001341551.1:p.Pro406Ser
NM_001354623.2:c.1216C>T	NP_001341552.1:p.Pro406Ser
NM_001354624.2:c.1165C>T	NP_001341553.1:p.Pro389Ser
NM_001354625.2:c.1165C>T	NP_001341554.1:p.Pro389Ser
NM_001354626.2:c.1165C>T	NP_001341555.1:p.Pro389Ser
NM_001354627.2:c.1165C>T	NP_001341556.1:p.Pro389Ser
NM_001354628.2:c.2146C>T	NP_001341557.1:p.Pro716Ser
NM_001354629.2:c.2140C>T	NP_001341558.1:p.Pro714Ser
NM_001354630.2:c.2074C>T	NP_001341559.1:p.Pro692Ser