Allele Registry

Canonical Allele Identifier: CA344838

Gene: LYST HGNC NCBI

Linked Data - Variant Effect Evidence

MyVariant.info:

GRCh38 chr1:g.235697252del

GRCh37 chr1:g.235860552del

Linked Data - NCBI & NCI

ClinVar RCV:

RCV000055719

ClinVar Variation:

65530

dbSNP:

80338670

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.235697255del , CM000663.2:g.235697255del	GRCh38
NC_000001.10:g.235860555del , CM000663.1:g.235860555del	GRCh37
NC_000001.9:g.233927178del	NCBI36
NG_007397.1:g.191389del , LRG_143:g.191389del

Transcript Alleles

HGVS	Amino-acid Change
ENST00000462376.2:n.1805del
ENST00000697178.1:c.*6090del	ENSP00000513163.1:n.*6090del
ENST00000697179.1:n.3104del
ENST00000697235.1:c.945del	ENSP00000513202.1:p.Gly316AlafsTer2
ENST00000697236.1:c.3859del	ENSP00000513203.1:n.3859del
ENST00000697237.1:c.1106del
ENST00000697240.1:c.2529del	ENSP00000513205.1:p.Gly844AlafsTer2
ENST00000389793.7:c.10395del MANE Select	ENSP00000374443.2:p.Gly3466AlafsTer2
ENST00000389793.6:c.10395del	ENSP00000374443.2:p.Gly3466AlafsTer2
ENST00000389794.7:c.*5819del	ENSP00000374444.4:n.*5819del
ENST00000473037.5:n.5385del
NM_000081.3:c.10395del , LRG_143t1:c.10395del	NP_000072.2:p.Gly3466AlafsTer2
NM_001301365.1:c.10395del , LRG_143t2:c.10395del	NP_001288294.1:p.Gly3466AlafsTer2
XM_011544031.1:c.10557del	XP_011542333.1:p.Gly3520AlafsTer2
XM_011544032.1:c.10557del	XP_011542334.1:p.Gly3520AlafsTer2
XM_011544033.1:c.10557del	XP_011542335.1:p.Gly3520AlafsTer2
XM_011544034.1:c.10419del	XP_011542336.1:p.Gly3474AlafsTer2
XM_011544036.1:c.8220del	XP_011542338.1:p.Gly2741AlafsTer2
XM_011544033.2:c.10557del	XP_011542335.1:p.Gly3520AlafsTer2
XM_011544036.2:c.8220del	XP_011542338.1:p.Gly2741AlafsTer2
XM_017000150.1:c.10326del	XP_016855639.1:p.Gly3443AlafsTer2
NM_000081.4:c.10395del MANE Select	NP_000072.2:p.Gly3466AlafsTer2

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