Canonical Allele Identifier: CA117358
Gene: VSX1 HGNC NCBI

Linked Data

ClinVar Variation Id: 5250
dbSNP Id: rs74315435

Genomic Alleles

HGVS Genome Assembly
NC_000020.11:g.25077727C>A , CM000682.2:g.25077727C>A GRCh38
NC_000020.10:g.25058363C>A , CM000682.1:g.25058363C>A GRCh37
NC_000020.9:g.25006363C>A NCBI36
NG_008101.1:g.9405G>T
NG_008101.2:g.9405G>T
NG_008101.3:g.9455G>T

Transcript Alleles

HGVS Amino-acid change
ENST00000376709.9:c.766G>T MANE Select ENSP00000365899.3:p.Ala256Ser
ENST00000376709.8:c.766G>T ENSP00000365899.3:p.Ala256Ser
ENST00000409285.6:c.766G>T ENSP00000386612.2:p.Ala256Ser
ENST00000409958.6:c.627+1102G>T ENSP00000387069.2:n.627+1102G>T
ENST00000429762.7:c.766G>T ENSP00000401690.3:p.Ala256Ser
ENST00000444511.6:c.627+1102G>T ENSP00000387720.2:n.627+1102G>T
ENST00000557285.1:n.273G>T
NM_001256271.1:c.627+1102G>T NP_001243200.1:n.627+1102G>T
NM_001256272.1:c.766G>T NP_001243201.1:p.Ala256Ser
NM_014588.5:c.766G>T NP_055403.2:p.Ala256Ser
NR_045948.1:n.1049G>T
NR_045951.1:n.910+1102G>T
XM_017027837.1:c.766G>T XP_016883326.1:p.Ala256Ser
XM_017027838.1:c.627+1102G>T XP_016883327.1:n.627+1102G>T
NM_014588.6:c.766G>T MANE Select NP_055403.2:p.Ala256Ser
NR_165181.1:n.776G>T
NR_165182.1:n.326G>T
NR_165183.1:n.326G>T
NR_165184.1:n.326G>T
NM_001256271.2:c.627+1102G>T NP_001243200.1:n.627+1102G>T
NM_001256272.2:c.766G>T NP_001243201.1:p.Ala256Ser
NM_001378633.1:c.73G>T NP_001365562.1:p.Ala25Ser
NR_045948.2:n.811G>T
NR_045951.2:n.672+1102G>T
NR_165181.2:n.658G>T
NR_165182.2:n.326G>T
NR_165183.2:n.326G>T