OUTAGE/INTERRUPTION NOTICE:2024-06-14T21:00:00-0400 — 2024-06-17T08:00:00-0400
The first of two essential broad service outages will occur over the weekend.
The outage is expected to be shorter than the indicated time, but due to its scope and importance, a longer window is planned.
Affected ClinGen services include the UIs and APIs of the Allele Registry, ACI, Cspec, Erepo, LDH
The first of two essential broad service outages will occur over the weekend.
The outage is expected to be shorter than the indicated time, but due to its scope and importance, a longer window is planned.
Affected ClinGen services include the UIs and APIs of the Allele Registry, ACI, Cspec, Erepo, LDH
Linked Data
ClinVar Variation Id:
89450
ClinVar RCV Id:
RCV000074918
RCV000129144
RCV000255857
RCV000524185
RCV001249986
RCV001532986
RCV002243694
RCV003460690
dbSNP Id:
rs63749942
gnomAD v2:
2-48033417-TGTC-T
gnomAD v4:
2-47806278-TGTC-T
Genomic Alleles
| HGVS | Genome Assembly |
|---|---|
| NC_000002.12:g.47806281_47806283del , CM000664.2:g.47806281_47806283del | GRCh38 |
| NC_000002.11:g.48033420_48033422del , CM000664.1:g.48033420_48033422del | GRCh37 |
| NC_000002.10:g.47886924_47886926del | NCBI36 |
| NG_007111.1:g.28135_28137del , LRG_219:g.28135_28137del | |
| NG_008397.1:g.104395_104397del |
Transcript Alleles
| HGVS | Amino-acid Change | |
|---|---|---|
| ENST00000411819.2:c.3427_3429del (MSH6) | ENSP00000406248.2:p.Arg1143del | |
| ENST00000420813.6:c.3427_3429del (MSH6) | ENSP00000390382.2:p.Arg1143del | |
| ENST00000455383.6:c.3427_3429del (MSH6) | ENSP00000397484.2:p.Arg1143del | |
| ENST00000700004.2:c.3340_3342del (MSH6) | ENSP00000514752.2:p.Arg1114del | |
| ENST00000699999.1:n.4398_4400del (MSH6) | ||
| ENST00000700000.1:c.2158_2160del (MSH6) | ENSP00000514749.1:p.Arg720del | |
| ENST00000700002.1:c.3730_3732del (MSH6) | ENSP00000514750.1:p.Arg1244del | |
| ENST00000700003.1:c.1179_1181del (MSH6) | ENSP00000514751.1:n.1179_1181del | |
| ENST00000700004.1:c.2497_2499del (MSH6) | ENSP00000514752.1:p.Arg833del | |
| ENST00000700005.1:n.2575_2577del (MSH6) | ||
| ENST00000700006.1:n.4882_4884del (MSH6) | ||
| ENST00000700007.1:n.2319_2321del (MSH6) | ||
| ENST00000700008.1:n.1893_1895del (MSH6) | ||
| ENST00000700009.1:n.2388_2390del (MSH6) | ||
| ENST00000700010.1:n.1133_1135del (MSH6) | ||
| ENST00000700011.1:n.3018_3020del (MSH6) | ||
| ENST00000682451.1:n.4467_4469del (FBXO11) | ||
| ENST00000684712.1:n.4729_4731del (FBXO11) | ||
| ENST00000234420.11:c.3724_3726del (MSH6) MANE Select | ENSP00000234420.5:p.Arg1242del | |
| ENST00000540021.6:c.3334_3336del (MSH6) | ENSP00000446475.1:p.Arg1112del | |
| ENST00000652107.1:c.3427_3429del (MSH6) | ENSP00000498629.1:p.Arg1143del | |
| ENST00000673637.1:c.3427_3429del (MSH6) | ENSP00000501310.1:p.Arg1143del | |
| ENST00000234420.9:c.3724_3726del (MSH6) | ENSP00000234420.4:p.Arg1242del | |
| ENST00000405808.5:c.169+1914_169+1916del (FBXO11) | ENSP00000385127.1:n.169+1914_169+1916del | |
| ENST00000434234.5:c.*124+1713_*124+1715del (FBXO11) | ENSP00000402692.1:n.*124+1713_*124+1715del | |
| ENST00000445503.5:c.*3071_*3073del (MSH6) | ENSP00000405294.1:n.*3071_*3073del | |
| ENST00000538136.1:c.2818_2820del (MSH6) | ENSP00000438580.1:p.Arg940del | |
| ENST00000540021.5:c.3334_3336del (MSH6) | ENSP00000446475.1:p.Arg1112del | |
| ENST00000614496.4:c.2818_2820del (MSH6) | ENSP00000477844.1:p.Arg940del | |
| ENST00000622629.4:c.628_630del (MSH6) | ENSP00000482078.1:p.Arg210del | |
| NM_000179.2:c.3724_3726del , LRG_219t1:c.3724_3726del (MSH6) | NP_000170.1:p.Arg1242del | |
| NM_001281492.1:c.3334_3336del (MSH6) | NP_001268421.1:p.Arg1112del | |
| NM_001281493.1:c.2818_2820del (MSH6) | NP_001268422.1:p.Arg940del | |
| NM_001281494.1:c.2818_2820del (MSH6) | NP_001268423.1:p.Arg940del | |
| XM_005264271.1:c.3427_3429del (MSH6) | XP_005264328.1:p.Arg1143del | |
| XM_011532798.1:c.3541_3543del (MSH6) | XP_011531100.1:p.Arg1181del | |
| XM_011532799.1:c.3427_3429del (MSH6) | XP_011531101.1:p.Arg1143del | |
| XM_011532800.1:c.3427_3429del (MSH6) | XP_011531102.1:p.Arg1143del | |
| XM_024452819.1:c.3724_3726del (MSH6) | XP_024308587.1:p.Arg1242del | |
| XM_024452820.1:c.3541_3543del (MSH6) | XP_024308588.1:p.Arg1181del | |
| XM_024452821.1:c.3427_3429del (MSH6) | XP_024308589.1:p.Arg1143del | |
| XM_024452822.1:c.2818_2820del (MSH6) | XP_024308590.1:p.Arg940del | |
| NM_000179.3:c.3724_3726del (MSH6) MANE Select | NP_000170.1:p.Arg1242del | |
| NM_001281492.2:c.3334_3336del (MSH6) | NP_001268421.1:p.Arg1112del | |
| NM_001281493.2:c.2818_2820del (MSH6) | NP_001268422.1:p.Arg940del | |
| NM_001281494.2:c.2818_2820del (MSH6) | NP_001268423.1:p.Arg940del |