Canonical Allele Identifier: CA1653349
Gene: LHCGR HGNC NCBI
STON1-GTF2A1L HGNC NCBI
GTF2A1L HGNC NCBI

Linked Data

ClinVar Variation Id: 419489
ClinVar RCV Id: RCV000480873
dbSNP Id: rs200639521
gnomAD v2: 2-48952813-A-G
gnomAD v3: 2-48725674-A-G
gnomAD v4: 2-48725674-A-G

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.48725674A>G , CM000664.2:g.48725674A>G GRCh38
NC_000002.11:g.48952813A>G , CM000664.1:g.48952813A>G GRCh37
NC_000002.10:g.48806317A>G NCBI36
NG_008193.1:g.35068T>C
NG_033050.1:g.200750A>G
NG_008193.2:g.35068T>C
NG_033050.2:g.200750A>G

Transcript Alleles

HGVS Amino-acid change
ENST00000294954.12:c.383+2T>C (LHCGR) MANE Select ENSP00000294954.6:n.383+2T>C
ENST00000294954.11:c.383+2T>C (LHCGR) ENSP00000294954.6:n.383+2T>C
ENST00000401907.5:c.383+2T>C (LHCGR) ENSP00000385406.1:n.383+2T>C
ENST00000402114.6:c.3442-50606A>G (STON1-GTF2A1L) ENSP00000385701.1:n.3442-50606A>G
ENST00000403273.5:c.383+2T>C (LHCGR) ENSP00000385847.1:n.383+2T>C
ENST00000405626.5:c.383+2T>C (LHCGR) ENSP00000386033.1:n.383+2T>C
ENST00000428232.2:c.281+2T>C (LHCGR) ENSP00000403748.1:n.281+2T>C
ENST00000508440.1:c.277-7219A>G (GTF2A1L) ENSP00000421474.1:n.277-7219A>G
ENST00000602369.3:c.308+2T>C ENSP00000473498.1:n.308+2T>C
NM_000233.3:c.383+2T>C (LHCGR) NP_000224.2:n.383+2T>C
NM_001198593.1:c.3442-50606A>G (STON1-GTF2A1L) NP_001185522.1:n.3442-50606A>G
XM_011532828.1:c.308+2T>C (LHCGR) XP_011531130.1:n.308+2T>C
XM_011532829.1:c.308+2T>C (LHCGR) XP_011531131.1:n.308+2T>C
XM_011532830.1:c.308+2T>C (LHCGR) XP_011531132.1:n.308+2T>C
XM_017004089.1:c.314+2T>C (LHCGR) XP_016859578.1:n.314+2T>C
NM_000233.4:c.383+2T>C (LHCGR) MANE Select NP_000224.2:n.383+2T>C
NM_001198593.2:c.3442-50606A>G (STON1-GTF2A1L) NP_001185522.1:n.3442-50606A>G