Canonical Allele Identifier: CA15489217
Gene: STAG3 HGNC NCBI
CASTOR3P HGNC NCBI

Linked Data

dbSNP Id: rs1637001
gnomAD v2: 7-99808151-G-A
gnomAD v3: 7-100210528-G-A
gnomAD v4: 7-100210528-G-A
MyVariant Identifiers: chr7:g.99808151G>A (hg19) chr7:g.100210528G>A (hg38)
Allelic Epigenome: Alellic Epigenome (raw data)
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Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.100210528G>A , CM000669.2:g.100210528G>A GRCh38
NC_000007.13:g.99808151G>A , CM000669.1:g.99808151G>A GRCh37
NC_000007.12:g.99646087G>A NCBI36
NG_034114.1:g.37805G>A

Transcript Alleles

HGVS Amino-acid change
ENST00000710637.1:c.29-483G>A ENSP00000518392.1:n.29-483G>A
ENST00000412190.6:c.*2671-483G>A (STAG3) ENSP00000395039.2:n.*2671-483G>A
ENST00000615138.5:c.3239-483G>A (STAG3) MANE Select ENSP00000477973.1:n.3239-483G>A
ENST00000620100.5:c.3065-483G>A (STAG3) ENSP00000484098.1:n.3065-483G>A
ENST00000649671.1:n.776-7925C>T (CASTOR3P)
ENST00000317296.9:c.3239-483G>A (STAG3) ENSP00000319318.5:n.3239-483G>A
ENST00000328453.9:c.*860+866C>T (CASTOR3P) ENSP00000482429.1:n.*860+866C>T
ENST00000394018.6:c.3065-483G>A (STAG3) ENSP00000377586.2:n.3065-483G>A
ENST00000412190.5:c.113-483G>A (STAG3) ENSP00000395039.1:n.113-483G>A
ENST00000414997.1:n.158+866C>T (CASTOR3P)
ENST00000426455.5:c.3239-483G>A (STAG3) ENSP00000400359.1:n.3239-483G>A
ENST00000436886.6:c.*49-7925C>T (CASTOR3P) ENSP00000389760.2:n.*49-7925C>T
ENST00000437485.5:n.130-7925C>T (CASTOR3P)
ENST00000440058.5:n.192-7925C>T (CASTOR3P)
ENST00000440830.5:n.2314-483G>A (STAG3)
ENST00000451963.1:c.29-483G>A (STAG3) ENSP00000393790.1:n.29-483G>A
ENST00000454084.5:c.536-7925C>T (CASTOR3P) ENSP00000479181.1:n.536-7925C>T
ENST00000491498.5:n.2226-483G>A (STAG3)
ENST00000496157.5:n.2771-483G>A (STAG3)
ENST00000543273.5:c.*173-7925C>T (CASTOR3P) ENSP00000481377.1:n.*173-7925C>T
ENST00000615138.4:c.3239-483G>A (STAG3) ENSP00000477973.1:n.3239-483G>A
ENST00000620100.4:c.3065-483G>A (STAG3) ENSP00000484098.1:n.3065-483G>A
NM_001282716.1:c.3239-483G>A (STAG3) NP_001269645.1:n.3239-483G>A
NM_001282717.1:c.3239-483G>A (STAG3) NP_001269646.1:n.3239-483G>A
NM_001282718.1:c.3065-483G>A (STAG3) NP_001269647.1:n.3065-483G>A
NM_012447.3:c.3239-483G>A (STAG3) NP_036579.2:n.3239-483G>A
NM_178831.6:c.*49-7925C>T (CASTOR3P) NP_849153.3:n.*49-7925C>T
NR_028038.1:n.2467C>T (CASTOR3P)
NR_028039.1:n.1601+866C>T (CASTOR3P)
NR_028040.1:n.914-7925C>T (CASTOR3P)
XM_005250116.1:c.3239-483G>A (STAG3) XP_005250173.1:n.3239-483G>A
XM_011515742.1:c.3239-483G>A (STAG3) XP_011514044.1:n.3239-483G>A
XM_011515743.1:c.3239-483G>A (STAG3) XP_011514045.1:n.3239-483G>A
XM_011515744.1:c.2957-483G>A (STAG3) XP_011514046.1:n.2957-483G>A
XM_011515745.1:c.2246-483G>A (STAG3) XP_011514047.1:n.2246-483G>A
XM_017011683.2:c.3239-483G>A (STAG3) XP_016867172.1:n.3239-483G>A
XM_017011684.1:c.3239-483G>A (STAG3) XP_016867173.1:n.3239-483G>A
XM_017011685.1:c.3239-483G>A (STAG3) XP_016867174.1:n.3239-483G>A
XM_017011686.2:c.3239-483G>A (STAG3) XP_016867175.1:n.3239-483G>A
XM_017011687.1:c.3065-483G>A (STAG3) XP_016867176.1:n.3065-483G>A
XM_017012153.1:c.*2460C>T (CASTOR3P) XP_016867642.1:n.*2460C>T
XM_017012154.1:c.646+2495C>T (CASTOR3P) XP_016867643.1:n.646+2495C>T
XM_017012155.1:c.622+2519C>T (CASTOR3P) XP_016867644.1:n.622+2519C>T
XM_017012156.1:c.535+12069C>T (CASTOR3P) XP_016867645.1:n.535+12069C>T
XM_017012157.1:c.536-7925C>T (CASTOR3P) XP_016867646.1:n.536-7925C>T
XM_017012158.2:c.*2806C>T (CASTOR3P) XP_016867647.1:n.*2806C>T
XR_001744710.1:n.1612+866C>T (CASTOR3P)
XR_001744711.1:n.2533C>T (CASTOR3P)
XR_001744712.1:n.1042+2519C>T (CASTOR3P)
XR_001744713.1:n.1262+2519C>T (CASTOR3P)
XR_002956433.1:n.3561C>T (CASTOR3P)
XR_002956434.1:n.3781C>T (CASTOR3P)
XR_002956435.1:n.2695+866C>T (CASTOR3P)
NM_001282717.2:c.3239-483G>A (STAG3) MANE Select NP_001269646.1:n.3239-483G>A
NM_001282718.2:c.3065-483G>A (STAG3) NP_001269647.1:n.3065-483G>A
NM_001375438.1:c.3239-483G>A (STAG3) NP_001362367.1:n.3239-483G>A
NM_012447.4:c.3239-483G>A (STAG3) NP_036579.2:n.3239-483G>A
NR_028038.2:n.2440C>T (CASTOR3P)
NR_166147.1:n.763-7925C>T (CASTOR3P)
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