WARNING - Protein Allele ID and Protein Sequence HGVS API Requests Temporarily Disabled:
We are investigating the periodic unresponsiveness in the Registry.
Although replication attempts were unsuccessful, there is a high correlation with protein alleles. And with haplotype HGVS queries.
This temporarily affects the API and the UI.
We are investigating the periodic unresponsiveness in the Registry.
Although replication attempts were unsuccessful, there is a high correlation with protein alleles. And with haplotype HGVS queries.
This temporarily affects the API and the UI.
Linked Data
ClinVar Variation Id:
2084
ClinVar RCV Id:
RCV000002165
dbSNP Id:
rs121434368
gnomAD v4:
19-12899471-C-T
PubMed:
PMID:8900228
Genomic Alleles
| HGVS | Genome Assembly |
|---|---|
| NC_000019.10:g.12899471C>T , CM000681.2:g.12899471C>T | GRCh38 |
| NC_000019.9:g.13010285C>T , CM000681.1:g.13010285C>T | GRCh37 |
| NC_000019.8:g.12871285C>T | NCBI36 |
| NG_009292.1:g.13312C>T | |
| NG_033049.1:g.24802G>A |
Transcript Alleles
| HGVS | Amino-acid change | |
|---|---|---|
| ENST00000222214.10:c.1247C>T (GCDH) MANE Select | ENSP00000222214.4:p.Thr416Ile | |
| ENST00000293695.8:c.613-86G>A (SYCE2) MANE Select | ENSP00000293695.6:n.613-86G>A | |
| ENST00000222214.9:c.1247C>T (GCDH) | ENSP00000222214.4:p.Thr416Ile | |
| ENST00000293695.7:c.613-86G>A (SYCE2) | ENSP00000293695.6:n.613-86G>A | |
| ENST00000585420.5:n.1577C>T (GCDH) | ||
| ENST00000590530.5:c.*687C>T (GCDH) | ENSP00000468452.1:n.*687C>T | |
| ENST00000591043.1:n.1557C>T (GCDH) | ||
| ENST00000591050.1:c.210+1608C>T (GCDH) | ||
| ENST00000591470.5:c.1247C>T (GCDH) | ENSP00000466845.1:p.Thr416Ile | |
| ENST00000592819.1:c.186-86G>A (SYCE2) | ||
| NM_000159.3:c.1247C>T (GCDH) | NP_000150.1:p.Thr416Ile | |
| NM_001105578.1:c.613-86G>A (SYCE2) | NP_001099048.1:n.613-86G>A | |
| NM_013976.3:c.1244-229C>T (GCDH) | NP_039663.1:n.1244-229C>T | |
| NR_102316.1:n.1410C>T (GCDH) | ||
| NR_102317.1:n.1628C>T (GCDH) | ||
| XM_005259848.3:c.*23-86G>A (SYCE2) | XP_005259905.1:n.*23-86G>A | |
| XM_006722721.2:c.1244-763C>T (GCDH) | XP_006722784.1:n.1244-763C>T | |
| XM_011527882.1:c.610-86G>A (SYCE2) | XP_011526184.1:n.610-86G>A | |
| XM_011527883.1:c.*23-86G>A (SYCE2) | XP_011526185.1:n.*23-86G>A | |
| XM_011527899.1:c.1243+1608C>T (GCDH) | XP_011526201.1:n.1243+1608C>T | |
| XM_011527900.1:c.1244-763C>T (GCDH) | XP_011526202.1:n.1244-763C>T | |
| XM_005259848.4:c.*23-86G>A (SYCE2) | XP_005259905.1:n.*23-86G>A | |
| XM_011527882.2:c.610-86G>A (SYCE2) | XP_011526184.1:n.610-86G>A | |
| XM_011527883.2:c.*23-86G>A (SYCE2) | XP_011526185.1:n.*23-86G>A | |
| XM_011527899.2:c.1243+1608C>T (GCDH) | XP_011526201.1:n.1243+1608C>T | |
| XM_011527900.2:c.1244-763C>T (GCDH) | XP_011526202.1:n.1244-763C>T | |
| XM_017026580.1:c.1244-763C>T (GCDH) | XP_016882069.1:n.1244-763C>T | |
| NM_000159.4:c.1247C>T (GCDH) MANE Select | NP_000150.1:p.Thr416Ile | |
| NM_001105578.2:c.613-86G>A (SYCE2) MANE Select | NP_001099048.1:n.613-86G>A | |
| NM_013976.4:c.1244-229C>T (GCDH) | NP_039663.1:n.1244-229C>T | |
| NM_013976.5:c.1244-229C>T (GCDH) | NP_039663.1:n.1244-229C>T |