Canonical Allele Identifier: CA253017
Gene: SMARCAL1 HGNC NCBI

Linked Data

ClinVar Variation Id: 4171
dbSNP Id: rs119473033

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.216478216G>T , CM000664.2:g.216478216G>T GRCh38
NC_000002.11:g.217342939G>T , CM000664.1:g.217342939G>T GRCh37
NC_000002.10:g.217051184G>T NCBI36
NG_009771.1:g.70803G>T , LRG_108:g.70803G>T

Transcript Alleles

HGVS Amino-acid change
ENST00000425815.6:c.2542G>T ENSP00000394410.2:p.Glu848Ter
ENST00000430374.6:c.2542G>T ENSP00000405077.2:p.Glu848Ter
ENST00000444508.6:c.2542G>T ENSP00000398969.2:p.Glu848Ter
ENST00000697899.1:c.2308G>T ENSP00000513470.1:p.Glu770Ter
ENST00000697901.1:c.*1297G>T ENSP00000513471.1:n.*1297G>T
ENST00000697903.1:c.*1029G>T ENSP00000513472.1:n.*1029G>T
ENST00000697904.1:c.*1029G>T ENSP00000513473.1:n.*1029G>T
ENST00000697905.1:c.*1029G>T ENSP00000513474.1:n.*1029G>T
ENST00000697906.1:c.2308G>T ENSP00000513475.1:p.Glu770Ter
ENST00000697907.1:c.*1400G>T ENSP00000513476.1:n.*1400G>T
ENST00000697908.1:n.2236G>T
ENST00000697909.1:n.1434G>T
ENST00000697910.1:n.939G>T
ENST00000697911.1:n.848G>T
ENST00000357276.9:c.2542G>T MANE Select ENSP00000349823.4:p.Glu848Ter
ENST00000357276.8:c.2542G>T ENSP00000349823.4:p.Glu848Ter
ENST00000358207.9:c.2542G>T ENSP00000350940.5:p.Glu848Ter
ENST00000392128.6:c.2068G>T ENSP00000375974.2:p.Glu690Ter
NM_001127207.1:c.2542G>T NP_001120679.1:p.Glu848Ter
NM_014140.3:c.2542G>T , LRG_108t1:c.2542G>T NP_054859.2:p.Glu848Ter
XM_005246631.2:c.2542G>T XP_005246688.1:p.Glu848Ter
XM_005246632.1:c.2542G>T XP_005246689.1:p.Glu848Ter
XM_006712557.1:c.2476G>T XP_006712620.1:p.Glu826Ter
XM_005246632.2:c.2542G>T XP_005246689.1:p.Glu848Ter
XM_017004228.2:c.1630G>T XP_016859717.1:p.Glu544Ter
NM_001127207.2:c.2542G>T NP_001120679.1:p.Glu848Ter
NM_014140.4:c.2542G>T MANE Select NP_054859.2:p.Glu848Ter