Canonical Allele Identifier: CA342073
Gene: CTNS HGNC NCBI

Linked Data

ClinVar Variation Id: 21438
dbSNP Id: rs113994204

Genomic Alleles

HGVS Genome Assembly
NC_000017.11:g.3648904_3648924del , CM000679.2:g.3648904_3648924del GRCh38
NC_000017.10:g.3552198_3552218del , CM000679.1:g.3552198_3552218del GRCh37
NC_000017.9:g.3498947_3498967del NCBI36
NG_012489.1:g.17437_17457del
NG_012489.2:g.17437_17457del

Transcript Alleles

HGVS Amino-acid change
ENST00000046640.9:c.198_218del MANE Select ENSP00000046640.4:p.Ile67_Pro73del
ENST00000381870.8:c.198_218del ENSP00000371294.3:p.Ile67_Pro73del
ENST00000399306.7:c.198_218del ENSP00000382245.2:p.Ile67_Pro73del
ENST00000488623.6:c.-530_-510del ENSP00000501016.1:n.-530_-510del
ENST00000574776.6:c.-112-6317_-112-6297del ENSP00000461118.2:n.-112-6317_-112-6297de...
ENST00000673669.1:c.-217+1382_-217+1402del ENSP00000501123.1:n.-217+1382_-217+1402de...
ENST00000673965.1:c.198_218del ENSP00000500995.1:p.Ile67_Pro73del
ENST00000046640.7:c.198_218del ENSP00000046640.3:p.Ile67_Pro73del
ENST00000381870.7:c.198_218del ENSP00000371294.3:p.Ile67_Pro73del
ENST00000399306.6:c.198_218del ENSP00000382245.2:p.Ile67_Pro73del
ENST00000452111.5:c.198_218del ENSP00000408652.1:p.Ile67_Pro73del
ENST00000467663.5:c.140+1382_140+1402del ENSP00000461056.1:n.140+1382_140+1402del
ENST00000488623.5:n.419_439del
ENST00000574218.1:c.-216-6094_-216-6074del ENSP00000458912.1:n.-216-6094_-216-6074de...
ENST00000574776.5:c.-112-6317_-112-6297del ENSP00000461118.1:n.-112-6317_-112-6297de...
ENST00000576979.1:c.198_218del ENSP00000458457.1:p.Ile67_Pro73del
NM_001031681.2:c.198_218del NP_001026851.2:p.Ile67_Pro73del
NM_004937.2:c.198_218del NP_004928.2:p.Ile67_Pro73del
XM_005256485.1:c.198_218del XP_005256542.1:p.Ile67_Pro73del
XM_006721463.1:c.198_218del XP_006721526.1:p.Ile67_Pro73del
XM_006721464.1:c.-217+1382_-217+1402del XP_006721527.1:n.-217+1382_-217+1402del
XM_011523691.1:c.198_218del XP_011521993.1:p.Ile67_Pro73del
XM_011523692.1:c.-244_-224del XP_011521994.1:n.-244_-224del
XR_934003.1:n.791_811del
XR_934164.1:n.430+1240_430+1260del
XM_005256485.3:c.198_218del XP_005256542.1:p.Ile67_Pro73del
XM_006721463.3:c.198_218del XP_006721526.1:p.Ile67_Pro73del
XM_006721464.2:c.-217+1382_-217+1402del XP_006721527.1:n.-217+1382_-217+1402del
XM_011523691.2:c.198_218del XP_011521993.1:p.Ile67_Pro73del
XM_011523692.2:c.-244_-224del XP_011521994.1:n.-244_-224del
XM_017024254.1:c.-216-6094_-216-6074del XP_016879743.1:n.-216-6094_-216-6074del
XM_017024255.1:c.-217+1382_-217+1402del XP_016879744.1:n.-217+1382_-217+1402del
XM_017024256.1:c.-244_-224del XP_016879745.1:n.-244_-224del
XM_017024257.1:c.-216-6094_-216-6074del XP_016879746.1:n.-216-6094_-216-6074del
XM_017024258.1:c.-217+1382_-217+1402del XP_016879747.1:n.-217+1382_-217+1402del
XR_001752758.1:n.452+1240_452+1260del
XR_001752759.1:n.324+1240_324+1260del
XR_001752760.1:n.452+1240_452+1260del
XR_001752761.2:n.452+1240_452+1260del
XR_002958115.1:n.139+1240_139+1260del
XR_934164.2:n.452+1240_452+1260del
NM_001374492.1:c.198_218del NP_001361421.1:p.Ile67_Pro73del
NM_001374493.1:c.-217+1382_-217+1402del NP_001361422.1:n.-217+1382_-217+1402del
NM_001374494.1:c.-244_-224del NP_001361423.1:n.-244_-224del
NM_001374495.1:c.-216-6094_-216-6074del NP_001361424.1:n.-216-6094_-216-6074del
NM_001374496.1:c.-217+1382_-217+1402del NP_001361425.1:n.-217+1382_-217+1402del
NM_004937.3:c.198_218del MANE Select NP_004928.2:p.Ile67_Pro73del
NM_001031681.3:c.198_218del NP_001026851.2:p.Ile67_Pro73del