Canonical Allele Identifier: CA349067916
Gene: SCN1A HGNC NCBI

Linked Data

ClinVar Variation Id: 427073
ClinVar RCV Id: RCV000489965
dbSNP Id: rs1085307942

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.165991900G>T , CM000664.2:g.165991900G>T GRCh38
NC_000002.11:g.166848410G>T , CM000664.1:g.166848410G>T GRCh37
NC_000002.10:g.166556656G>T NCBI36
NG_011906.1:g.86740C>A , LRG_8:g.86740C>A

Transcript Alleles

HGVS Amino-acid change
ENST00000689288.1:c.*3411C>A ENSP00000509637.1:n.*3411C>A
ENST00000303395.9:c.5375C>A ENSP00000303540.4:p.Ala1792Asp
ENST00000635750.1:c.5342C>A ENSP00000490799.1:p.Ala1781Asp
ENST00000635776.1:c.*2208C>A ENSP00000490692.1:n.*2208C>A
ENST00000636194.1:c.*2868C>A ENSP00000490288.1:n.*2868C>A
ENST00000637038.1:c.2237C>A
ENST00000637988.1:c.5342C>A ENSP00000490780.1:p.Ala1781Asp
ENST00000640036.1:c.5342C>A ENSP00000491573.1:p.Ala1781Asp
ENST00000641575.1:c.5339C>A ENSP00000492917.1:p.Ala1780Asp
ENST00000641603.1:c.5093C>A ENSP00000492945.1:p.Ala1698Asp
ENST00000641996.1:c.*4929C>A ENSP00000493054.1:n.*4929C>A
ENST00000671940.1:c.*3318C>A ENSP00000500336.1:n.*3318C>A
ENST00000673490.1:n.7848C>A
ENST00000674923.1:c.5375C>A MANE Select ENSP00000501589.1:p.Ala1792Asp
ENST00000303395.8:c.5375C>A ENSP00000303540.4:p.Ala1792Asp
ENST00000375405.7:c.5342C>A ENSP00000364554.3:p.Ala1781Asp
ENST00000409050.1:c.5291C>A ENSP00000386312.1:p.Ala1764Asp
ENST00000423058.6:c.5375C>A ENSP00000407030.2:p.Ala1792Asp
NM_001165963.1:c.5375C>A NP_001159435.1:p.Ala1792Asp
NM_001165964.1:c.5291C>A NP_001159436.1:p.Ala1764Asp
NM_001202435.1:c.5375C>A NP_001189364.1:p.Ala1792Asp
NM_006920.4:c.5342C>A , LRG_8t1:c.5342C>A NP_008851.3:p.Ala1781Asp
NR_110598.1:n.176-23713G>T
XM_011511598.1:c.5375C>A XP_011509900.1:p.Ala1792Asp
XM_011511599.1:c.5375C>A XP_011509901.1:p.Ala1792Asp
XM_011511600.1:c.5375C>A XP_011509902.1:p.Ala1792Asp
XM_011511601.1:c.5375C>A XP_011509903.1:p.Ala1792Asp
XM_011511602.1:c.5375C>A XP_011509904.1:p.Ala1792Asp
XM_011511603.1:c.5372C>A XP_011509905.1:p.Ala1791Asp
XM_011511604.1:c.5342C>A XP_011509906.1:p.Ala1781Asp
XM_011511605.1:c.5339C>A XP_011509907.1:p.Ala1780Asp
XM_011511606.1:c.5291C>A XP_011509908.1:p.Ala1764Asp
XM_011511607.1:c.5093C>A XP_011509909.1:p.Ala1698Asp
NM_001165963.2:c.5375C>A NP_001159435.1:p.Ala1792Asp
NM_001165964.2:c.5291C>A NP_001159436.1:p.Ala1764Asp
NM_001202435.2:c.5375C>A NP_001189364.1:p.Ala1792Asp
NM_001353948.1:c.5375C>A NP_001340877.1:p.Ala1792Asp
NM_001353949.1:c.5342C>A NP_001340878.1:p.Ala1781Asp
NM_001353950.1:c.5342C>A NP_001340879.1:p.Ala1781Asp
NM_001353951.1:c.5342C>A NP_001340880.1:p.Ala1781Asp
NM_001353952.1:c.5342C>A NP_001340881.1:p.Ala1781Asp
NM_001353954.1:c.5339C>A NP_001340883.1:p.Ala1780Asp
NM_001353955.1:c.5339C>A NP_001340884.1:p.Ala1780Asp
NM_001353957.1:c.5291C>A NP_001340886.1:p.Ala1764Asp
NM_001353958.1:c.5291C>A NP_001340887.1:p.Ala1764Asp
NM_001353960.1:c.5288C>A NP_001340889.1:p.Ala1763Asp
NM_001353961.1:c.2933C>A NP_001340890.1:p.Ala978Asp
NM_006920.5:c.5342C>A NP_008851.3:p.Ala1781Asp
NR_148667.1:n.5811C>A
XR_001738883.1:n.5825C>A
XR_001738884.1:n.5797C>A
NM_001165963.3:c.5375C>A NP_001159435.1:p.Ala1792Asp
NM_001165964.3:c.5291C>A NP_001159436.1:p.Ala1764Asp
NM_001202435.3:c.5375C>A NP_001189364.1:p.Ala1792Asp
NM_001353948.2:c.5375C>A NP_001340877.1:p.Ala1792Asp
NM_001353949.2:c.5342C>A NP_001340878.1:p.Ala1781Asp
NM_001353950.2:c.5342C>A NP_001340879.1:p.Ala1781Asp
NM_001353951.2:c.5342C>A NP_001340880.1:p.Ala1781Asp
NM_001353952.2:c.5342C>A NP_001340881.1:p.Ala1781Asp
NM_001353954.2:c.5339C>A NP_001340883.1:p.Ala1780Asp
NM_001353955.2:c.5339C>A NP_001340884.1:p.Ala1780Asp
NM_001353957.2:c.5291C>A NP_001340886.1:p.Ala1764Asp
NM_001353958.2:c.5291C>A NP_001340887.1:p.Ala1764Asp
NM_001353960.2:c.5288C>A NP_001340889.1:p.Ala1763Asp
NM_001353961.2:c.2933C>A NP_001340890.1:p.Ala978Asp
NM_006920.6:c.5342C>A NP_008851.3:p.Ala1781Asp
NR_148667.2:n.5792C>A
NM_001165963.4:c.5375C>A MANE Select NP_001159435.1:p.Ala1792Asp