Canonical Allele Identifier: CA16617583
Gene: MSH2 HGNC NCBI

Linked Data

ClinVar Variation Id: 422243
ClinVar RCV Id: RCV003449225 RCV003593967
dbSNP Id: rs1064795653
MyVariant Identifiers: chr2:g.47693856del (hg19) chr2:g.47466717del (hg38)
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Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47466717del , CM000664.2:g.47466717del GRCh38
NC_000002.11:g.47693856del , CM000664.1:g.47693856del GRCh37
NC_000002.10:g.47547360del NCBI36
NG_007110.2:g.68594del , LRG_218:g.68594del

Transcript Alleles

HGVS Amino-acid change
ENST00000644900.2:c.1570del ENSP00000495641.2:p.Arg524ValfsTer2
ENST00000233146.7:c.1570del MANE Select ENSP00000233146.2:p.Arg524ValfsTer2
ENST00000543555.6:c.1372del ENSP00000442697.1:p.Arg458ValfsTer2
ENST00000644092.1:c.1570del ENSP00000496351.1:p.Arg524ValfsTer2
ENST00000645339.1:c.1570del ENSP00000496441.1:p.Arg524ValfsTer2
ENST00000645506.1:c.1570del ENSP00000495455.1:p.Arg524ValfsTer2
ENST00000646415.1:c.1570del ENSP00000495543.1:p.Arg524ValfsTer2
ENST00000233146.6:c.1570del ENSP00000233146.2:p.Arg524ValfsTer2
ENST00000406134.5:c.1570del ENSP00000384199.1:p.Arg524ValfsTer2
ENST00000543555.5:c.1372del ENSP00000442697.1:p.Arg458ValfsTer2
ENST00000610696.4:c.1570del ENSP00000483159.1:p.Arg524ValfsTer2
ENST00000613514.4:c.*110del ENSP00000484137.1:n.*110del
ENST00000617333.3:c.*336del ENSP00000482468.1:n.*336del
ENST00000617938.4:c.*542del ENSP00000481158.1:n.*542del
ENST00000621359.2:c.1570del ENSP00000481416.1:p.Arg524ValfsTer2
NM_000251.2:c.1570del , LRG_218t1:c.1570del NP_000242.1:p.Arg524ValfsTer2
NM_001258281.1:c.1372del NP_001245210.1:p.Arg458ValfsTer2
XM_005264332.2:c.1570del XP_005264389.2:p.Arg524ValfsTer2
XM_011532867.1:c.1570del XP_011531169.1:p.Arg524ValfsTer2
XR_939685.1:n.1642del
XM_005264332.4:c.1570del XP_005264389.2:p.Arg524ValfsTer2
XM_011532867.2:c.1570del XP_011531169.1:p.Arg524ValfsTer2
XR_001738747.2:n.1632del
XR_939685.2:n.1632del
NM_000251.3:c.1570del MANE Select NP_000242.1:p.Arg524ValfsTer2
Search 100 bp 5'
Search 100 bp 3'