Canonical Allele Identifier: CA16617566
Gene: MSH2 HGNC NCBI

Linked Data

ClinVar Variation Id: 420949
ClinVar RCV Id: RCV000484912 RCV000491867 RCV001851197
dbSNP Id: rs1064794809
MyVariant Identifiers: chr2:g.47641486del (hg19) chr2:g.47414347del (hg38)
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Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.47414347del , CM000664.2:g.47414347del GRCh38
NC_000002.11:g.47641486del , CM000664.1:g.47641486del GRCh37
NC_000002.10:g.47494990del NCBI36
NG_007110.2:g.16224del , LRG_218:g.16224del

Transcript Alleles

HGVS Amino-acid change
ENST00000644900.2:c.871del ENSP00000495641.2:p.Leu291Ter
ENST00000233146.7:c.871del MANE Select ENSP00000233146.2:p.Leu291Ter
ENST00000543555.6:c.673del ENSP00000442697.1:p.Leu225Ter
ENST00000644092.1:c.871del ENSP00000496351.1:p.Leu291Ter
ENST00000645339.1:c.871del ENSP00000496441.1:p.Leu291Ter
ENST00000645506.1:c.871del ENSP00000495455.1:p.Leu291Ter
ENST00000646415.1:c.871del ENSP00000495543.1:p.Leu291Ter
ENST00000233146.6:c.871del ENSP00000233146.2:p.Leu291Ter
ENST00000406134.5:c.871del ENSP00000384199.1:p.Leu291Ter
ENST00000543555.5:c.673del ENSP00000442697.1:p.Leu225Ter
ENST00000610696.4:c.871del ENSP00000483159.1:p.Leu291Ter
ENST00000613514.4:c.871del ENSP00000484137.1:p.Leu291Ter
ENST00000617333.3:c.871del ENSP00000482468.1:p.Leu291Ter
ENST00000617938.4:c.871del ENSP00000481158.1:p.Leu291Ter
ENST00000621359.2:c.871del ENSP00000481416.1:p.Leu291Ter
NM_000251.2:c.871del , LRG_218t1:c.871del NP_000242.1:p.Leu291Ter
NM_001258281.1:c.673del NP_001245210.1:p.Leu225Ter
XM_005264332.2:c.871del XP_005264389.2:p.Leu291Ter
XM_011532867.1:c.871del XP_011531169.1:p.Leu291Ter
XR_939685.1:n.943del
XM_005264332.4:c.871del XP_005264389.2:p.Leu291Ter
XM_011532867.2:c.871del XP_011531169.1:p.Leu291Ter
XR_001738747.2:n.933del
XR_939685.2:n.933del
NM_000251.3:c.871del MANE Select NP_000242.1:p.Leu291Ter
Search 100 bp 5'
Search 100 bp 3'