Canonical Allele Identifier: CA16042429
Gene: SCN1A HGNC NCBI

Linked Data

ClinVar Variation Id: 372740
ClinVar RCV Id: RCV000414318
dbSNP Id: rs1057517958

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.165991711G>A , CM000664.2:g.165991711G>A GRCh38
NC_000002.11:g.166848221G>A , CM000664.1:g.166848221G>A GRCh37
NC_000002.10:g.166556467G>A NCBI36
NG_011906.1:g.86929C>T , LRG_8:g.86929C>T

Transcript Alleles

HGVS Amino-acid change
ENST00000689288.1:c.*3600C>T ENSP00000509637.1:n.*3600C>T
ENST00000303395.9:c.5564C>T ENSP00000303540.4:p.Pro1855Leu
ENST00000635750.1:c.5531C>T ENSP00000490799.1:p.Pro1844Leu
ENST00000635776.1:c.*2397C>T ENSP00000490692.1:n.*2397C>T
ENST00000636194.1:c.*3057C>T ENSP00000490288.1:n.*3057C>T
ENST00000637038.1:c.2426C>T
ENST00000637988.1:c.5531C>T ENSP00000490780.1:p.Pro1844Leu
ENST00000640036.1:c.5531C>T ENSP00000491573.1:p.Pro1844Leu
ENST00000641575.1:c.5528C>T ENSP00000492917.1:p.Pro1843Leu
ENST00000641603.1:c.5282C>T ENSP00000492945.1:p.Pro1761Leu
ENST00000641996.1:c.*5118C>T ENSP00000493054.1:n.*5118C>T
ENST00000671940.1:c.*3507C>T ENSP00000500336.1:n.*3507C>T
ENST00000673490.1:n.8037C>T
ENST00000674923.1:c.5564C>T MANE Select ENSP00000501589.1:p.Pro1855Leu
ENST00000303395.8:c.5564C>T ENSP00000303540.4:p.Pro1855Leu
ENST00000375405.7:c.5531C>T ENSP00000364554.3:p.Pro1844Leu
ENST00000409050.1:c.5480C>T ENSP00000386312.1:p.Pro1827Leu
ENST00000423058.6:c.5564C>T ENSP00000407030.2:p.Pro1855Leu
NM_001165963.1:c.5564C>T NP_001159435.1:p.Pro1855Leu
NM_001165964.1:c.5480C>T NP_001159436.1:p.Pro1827Leu
NM_001202435.1:c.5564C>T NP_001189364.1:p.Pro1855Leu
NM_006920.4:c.5531C>T , LRG_8t1:c.5531C>T NP_008851.3:p.Pro1844Leu
NR_110598.1:n.176-23902G>A
XM_011511598.1:c.5564C>T XP_011509900.1:p.Pro1855Leu
XM_011511599.1:c.5564C>T XP_011509901.1:p.Pro1855Leu
XM_011511600.1:c.5564C>T XP_011509902.1:p.Pro1855Leu
XM_011511601.1:c.5564C>T XP_011509903.1:p.Pro1855Leu
XM_011511602.1:c.5564C>T XP_011509904.1:p.Pro1855Leu
XM_011511603.1:c.5561C>T XP_011509905.1:p.Pro1854Leu
XM_011511604.1:c.5531C>T XP_011509906.1:p.Pro1844Leu
XM_011511605.1:c.5528C>T XP_011509907.1:p.Pro1843Leu
XM_011511606.1:c.5480C>T XP_011509908.1:p.Pro1827Leu
XM_011511607.1:c.5282C>T XP_011509909.1:p.Pro1761Leu
NM_001165963.2:c.5564C>T NP_001159435.1:p.Pro1855Leu
NM_001165964.2:c.5480C>T NP_001159436.1:p.Pro1827Leu
NM_001202435.2:c.5564C>T NP_001189364.1:p.Pro1855Leu
NM_001353948.1:c.5564C>T NP_001340877.1:p.Pro1855Leu
NM_001353949.1:c.5531C>T NP_001340878.1:p.Pro1844Leu
NM_001353950.1:c.5531C>T NP_001340879.1:p.Pro1844Leu
NM_001353951.1:c.5531C>T NP_001340880.1:p.Pro1844Leu
NM_001353952.1:c.5531C>T NP_001340881.1:p.Pro1844Leu
NM_001353954.1:c.5528C>T NP_001340883.1:p.Pro1843Leu
NM_001353955.1:c.5528C>T NP_001340884.1:p.Pro1843Leu
NM_001353957.1:c.5480C>T NP_001340886.1:p.Pro1827Leu
NM_001353958.1:c.5480C>T NP_001340887.1:p.Pro1827Leu
NM_001353960.1:c.5477C>T NP_001340889.1:p.Pro1826Leu
NM_001353961.1:c.3122C>T NP_001340890.1:p.Pro1041Leu
NM_006920.5:c.5531C>T NP_008851.3:p.Pro1844Leu
NR_148667.1:n.6000C>T
XR_001738883.1:n.6014C>T
XR_001738884.1:n.5986C>T
NM_001165963.3:c.5564C>T NP_001159435.1:p.Pro1855Leu
NM_001165964.3:c.5480C>T NP_001159436.1:p.Pro1827Leu
NM_001202435.3:c.5564C>T NP_001189364.1:p.Pro1855Leu
NM_001353948.2:c.5564C>T NP_001340877.1:p.Pro1855Leu
NM_001353949.2:c.5531C>T NP_001340878.1:p.Pro1844Leu
NM_001353950.2:c.5531C>T NP_001340879.1:p.Pro1844Leu
NM_001353951.2:c.5531C>T NP_001340880.1:p.Pro1844Leu
NM_001353952.2:c.5531C>T NP_001340881.1:p.Pro1844Leu
NM_001353954.2:c.5528C>T NP_001340883.1:p.Pro1843Leu
NM_001353955.2:c.5528C>T NP_001340884.1:p.Pro1843Leu
NM_001353957.2:c.5480C>T NP_001340886.1:p.Pro1827Leu
NM_001353958.2:c.5480C>T NP_001340887.1:p.Pro1827Leu
NM_001353960.2:c.5477C>T NP_001340889.1:p.Pro1826Leu
NM_001353961.2:c.3122C>T NP_001340890.1:p.Pro1041Leu
NM_006920.6:c.5531C>T NP_008851.3:p.Pro1844Leu
NR_148667.2:n.5981C>T
NM_001165963.4:c.5564C>T MANE Select NP_001159435.1:p.Pro1855Leu