Canonical Allele Identifier: CA16040745
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 371629
ClinVar RCV Id: RCV000410384
dbSNP Id: rs1057517422

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46190763del , CM000663.2:g.46190763del GRCh38
NC_000001.10:g.46656435del , CM000663.1:g.46656435del GRCh37
NC_000001.9:g.46429022del NCBI36
NG_009205.2:g.34544del
NG_009205.3:g.34544del

Transcript Alleles

HGVS Amino-acid change
ENST00000396420.8:c.1562del (POMGNT1) ENSP00000379698.4:p.Lys521SerfsTer16
ENST00000477114.2:n.2124del (POMGNT1)
ENST00000497439.6:n.1734del (POMGNT1)
ENST00000684817.1:n.1922del (POMGNT1)
ENST00000684898.1:n.2124del (POMGNT1)
ENST00000685230.1:c.*872del (POMGNT1) ENSP00000510305.1:n.*872del
ENST00000685275.1:n.2109del (POMGNT1)
ENST00000685444.1:c.1463del (POMGNT1) ENSP00000510762.1:p.Lys488SerfsTer16
ENST00000685704.1:n.2124del (POMGNT1)
ENST00000685775.1:n.4402del (POMGNT1)
ENST00000685833.1:n.3753del (POMGNT1)
ENST00000686252.1:n.2636del (POMGNT1)
ENST00000686379.1:c.*686del (POMGNT1) ENSP00000508913.1:n.*686del
ENST00000686724.1:n.3047del (POMGNT1)
ENST00000686737.1:c.1562del (POMGNT1) ENSP00000508736.1:p.Lys521SerfsTer16
ENST00000687112.1:n.2428del (POMGNT1)
ENST00000687149.1:c.1540-141del (POMGNT1) ENSP00000509745.1:n.1540-141del
ENST00000687197.1:c.*502del (POMGNT1) ENSP00000510749.1:n.*502del
ENST00000687235.1:n.3437del (POMGNT1)
ENST00000687613.1:n.2290-773del (POMGNT1)
ENST00000687683.1:c.1562del (POMGNT1) ENSP00000508522.1:p.Lys521SerfsTer16
ENST00000688032.1:n.2124del (POMGNT1)
ENST00000688596.1:n.2213del (POMGNT1)
ENST00000688608.1:c.1463del (POMGNT1) ENSP00000508890.1:p.Lys488SerfsTer16
ENST00000688919.1:n.2758del (POMGNT1)
ENST00000689031.1:n.2102-773del (POMGNT1)
ENST00000689717.1:n.1734del (POMGNT1)
ENST00000689756.1:c.*1194del (POMGNT1) ENSP00000509023.1:n.*1194del
ENST00000690377.1:n.1909del (POMGNT1)
ENST00000690678.1:c.1562del (POMGNT1) ENSP00000508703.1:p.Lys521SerfsTer16
ENST00000691209.1:c.*502del (POMGNT1) ENSP00000510112.1:n.*502del
ENST00000691243.1:c.1562del (POMGNT1) ENSP00000510654.1:p.Lys521SerfsTer13
ENST00000692169.1:n.3024del (POMGNT1)
ENST00000692202.1:n.2137del (POMGNT1)
ENST00000692322.1:c.*1392-245del (POMGNT1) ENSP00000509017.1:n.*1392-245del
ENST00000692369.1:c.1562del (POMGNT1) ENSP00000508453.1:p.Lys521SerfsTer16
ENST00000692599.1:n.3437del (POMGNT1)
ENST00000692635.1:c.*480-245del (POMGNT1) ENSP00000508425.1:n.*480-245del
ENST00000693168.1:n.3136del (POMGNT1)
ENST00000693218.1:c.1562del (POMGNT1) ENSP00000510577.1:p.Lys521SerfsTer?
ENST00000693223.1:n.2510del (POMGNT1)
ENST00000693365.1:n.5509del (POMGNT1)
ENST00000371984.8:c.1562del (POMGNT1) MANE Select ENSP00000361052.3:p.Lys521SerfsTer16
ENST00000371984.7:c.1562del (POMGNT1) ENSP00000361052.3:p.Lys521SerfsTer16
ENST00000371992.1:c.1562del (POMGNT1) ENSP00000361060.1:p.Lys521SerfsTer16
ENST00000396420.7:c.*1231del (POMGNT1) ENSP00000379698.3:n.*1231del
ENST00000480972.1:n.211del (POMGNT1)
ENST00000485714.1:n.2261del (POMGNT1)
NM_001243766.1:c.1562del (POMGNT1) NP_001230695.1:p.Lys521SerfsTer16
NM_001290129.1:c.1496del (POMGNT1) NP_001277058.1:p.Lys499SerfsTer16
NM_001290130.1:c.1133del (POMGNT1) NP_001277059.1:p.Lys378SerfsTer16
NM_017739.3:c.1562del (POMGNT1) NP_060209.3:p.Lys521SerfsTer16
XM_005271010.1:c.1562del (POMGNT1) XP_005271067.1:p.Lys521SerfsTer16
XM_006710755.1:c.1562del (POMGNT1) XP_006710818.1:p.Lys521SerfsTer16
XM_006710756.1:c.1562del (POMGNT1) XP_006710819.1:p.Lys521SerfsTer16
XM_011540460.1:c.679-5439del (TSPAN1) XP_011538762.1:n.679-5439del
XM_011540461.1:c.634-5439del (TSPAN1) XP_011538763.1:n.634-5439del
XM_011541759.1:c.1496del (POMGNT1) XP_011540061.1:p.Lys499SerfsTer16
XM_011541760.1:c.1496del (POMGNT1) XP_011540062.1:p.Lys499SerfsTer16
XM_011541761.1:c.470del (POMGNT1) XP_011540063.1:p.Lys157SerfsTer16
XM_011540460.3:c.679-5439del (TSPAN1) XP_011538762.1:n.679-5439del
XM_011541760.3:c.1496del (POMGNT1) XP_011540062.1:p.Lys499SerfsTer16
XM_017001690.1:c.1562del (POMGNT1) XP_016857179.1:p.Lys521SerfsTer16
NM_001243766.2:c.1562del (POMGNT1) NP_001230695.2:p.Lys521SerfsTer16
NM_001290129.2:c.1496del (POMGNT1) NP_001277058.2:p.Lys499SerfsTer16
NM_001290130.2:c.1133del (POMGNT1) NP_001277059.2:p.Lys378SerfsTer16
NM_017739.4:c.1562del (POMGNT1) MANE Select NP_060209.4:p.Lys521SerfsTer16