Canonical Allele Identifier: CA256568
Gene: SOX2 HGNC NCBI
SOX2-OT HGNC NCBI

Linked Data

ClinVar Variation Id: 12820
ClinVar RCV Id: RCV000013668
dbSNP Id: rs104893804

Genomic Alleles

HGVS Genome Assembly
NC_000003.12:g.181712523C>T , CM000665.2:g.181712523C>T GRCh38
NC_000003.11:g.181430311C>T , CM000665.1:g.181430311C>T GRCh37
NC_000003.10:g.182913005C>T NCBI36
NG_009080.1:g.5590C>T , LRG_719:g.5590C>T

Transcript Alleles

HGVS Amino-acid change
ENST00000325404.3:c.163C>T (SOX2) MANE Select ENSP00000323588.1:p.Gln55Ter
ENST00000325404.2:c.163C>T (SOX2) ENSP00000323588.1:p.Gln55Ter
NM_003106.3:c.163C>T (SOX2) NP_003097.1:p.Gln55Ter
NR_004053.3:n.768-2662C>T (SOX2-OT)
NR_075089.1:n.767+12640C>T (SOX2-OT)
NR_075090.1:n.482-27046C>T (SOX2-OT)
NR_075091.1:n.783-2662C>T (SOX2-OT)
NR_075092.1:n.782+12640C>T (SOX2-OT)
NR_075093.1:n.473-27046C>T (SOX2-OT)
NM_003106.4:c.163C>T (SOX2) MANE Select NP_003097.1:p.Gln55Ter